Friday, August 4, 2023

APPDX Chimera 009

This is an appendix to: Chimera Detection






Full Genome
Table: 1
Link and genome info: WOEV01000423.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_182
whole genome shotgun sequence


Nucleotide count: 12,796
'N' Nucleotide Count: 351

Atom Atom Count Percent
Carbon 61,020 32.15
Hydrogen 67,188 35.40
Nitrogen 48,436 25.52
Oxygen 13,164 6.94
Totals 189,808 100.00



Full Genome
Table: 2
Link and genome info: WOEV01000413.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_204
whole genome shotgun sequence


Nucleotide count: 4,598
'N' Nucleotide Count: 3,644

Atom Atom Count Percent
Carbon 22,012 32.05
Hydrogen 24,134 35.14
Nitrogen 17,602 25.63
Oxygen 4,937 7.19
Totals 68,685 100.00



Full Genome
Table: 3
Link and genome info: WOEV01000427.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_207
whole genome shotgun sequence


Nucleotide count: 14,977
'N' Nucleotide Count: 624

Atom Atom Count Percent
Carbon 71,157 32.18
Hydrogen 78,839 35.65
Nitrogen 55,567 25.13
Oxygen 15,580 7.05
Totals 221,143 100.00



Full Genome
Table: 4
Link and genome info: WOEV01000419.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_187
whole genome shotgun sequence


Nucleotide count: 6,319
'N' Nucleotide Count: 3,845

Atom Atom Count Percent
Carbon 29,231 31.97
Hydrogen 32,677 35.74
Nitrogen 23,621 25.83
Oxygen 5,902 6.46
Totals 91,431 100.00



Full Genome
Table: 5
Link and genome info: WOEV01000411.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_31
whole genome shotgun sequence


Nucleotide count: 5,749
'N' Nucleotide Count: 289

Atom Atom Count Percent
Carbon 27,156 32.05
Hydrogen 30,047 35.47
Nitrogen 21,661 25.57
Oxygen 5,856 6.91
Totals 84,720 100.00



Full Genome
Table: 6
Link and genome info: WOEV01000429.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_44
whole genome shotgun sequence


Nucleotide count: 14,148
'N' Nucleotide Count: 2,452

Atom Atom Count Percent
Carbon 67,610 32.14
Hydrogen 74,308 35.32
Nitrogen 53,776 25.56
Oxygen 14,695 6.98
Totals 210,389 100.00



Full Genome
Table: 7
Link and genome info: WOEV01000424.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_184
whole genome shotgun sequence


Nucleotide count: 13,114
'N' Nucleotide Count: 832

Atom Atom Count Percent
Carbon 62,560 32.18
Hydrogen 68,916 35.45
Nitrogen 49,512 25.47
Oxygen 13,397 6.89
Totals 194,385 100.00



Full Genome
Table: 8
Link and genome info: WOEV01000421.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_188
whole genome shotgun sequence


Nucleotide count: 10,265
'N' Nucleotide Count: 2,294

Atom Atom Count Percent
Carbon 48,668 32.16
Hydrogen 53,636 35.44
Nitrogen 39,078 25.82
Oxygen 9,968 6.59
Totals 151,350 100.00



Full Genome
Table: 9
Link and genome info: WOEV01000417.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_196
whole genome shotgun sequence


Nucleotide count: 8,919
'N' Nucleotide Count: 400

Atom Atom Count Percent
Carbon 41,851 32.08
Hydrogen 46,400 35.57
Nitrogen 33,692 25.83
Oxygen 8,509 6.52
Totals 130,452 100.00



Full Genome
Table: 10
Link and genome info: WOEV01000420.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_17
whole genome shotgun sequence


Nucleotide count: 8,938
'N' Nucleotide Count: 1,321

Atom Atom Count Percent
Carbon 42,250 32.09
Hydrogen 46,694 35.46
Nitrogen 33,798 25.67
Oxygen 8,921 6.78
Totals 131,663 100.00



Full Genome
Table: 11
Link and genome info: WOEV01000428.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_104
whole genome shotgun sequence


Nucleotide count: 15,421
'N' Nucleotide Count: 564

Atom Atom Count Percent
Carbon 72,398 32.10
Hydrogen 80,389 35.64
Nitrogen 57,839 25.64
Oxygen 14,945 6.63
Totals 225,571 100.00



Full Genome
Table: 12
Link and genome info: WOEV01000422.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_211
whole genome shotgun sequence


Nucleotide count: 12,246
'N' Nucleotide Count: 434

Atom Atom Count Percent
Carbon 58,345 32.09
Hydrogen 64,156 35.28
Nitrogen 46,682 25.67
Oxygen 12,659 6.96
Totals 181,842 100.00



Full Genome
Table: 13
Link and genome info: WOEV01000430.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_192
whole genome shotgun sequence


Nucleotide count: 17,272
'N' Nucleotide Count: 850

Atom Atom Count Percent
Carbon 81,068 32.12
Hydrogen 90,196 35.74
Nitrogen 64,268 25.46
Oxygen 16,856 6.68
Totals 252,388 100.00



Full Genome
Table: 14
Link and genome info: WOEV01000415.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_195
whole genome shotgun sequence


Nucleotide count: 5,486
'N' Nucleotide Count: 3,636

Atom Atom Count Percent
Carbon 25,552 32.03
Hydrogen 28,391 35.59
Nitrogen 20,791 26.06
Oxygen 5,036 6.31
Totals 79,770 100.00



Full Genome
Table: 15
Link and genome info: WOEV01000425.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_189
whole genome shotgun sequence


Nucleotide count: 8,394
'N' Nucleotide Count: 5,912

Atom Atom Count Percent
Carbon 38,877 31.99
Hydrogen 43,414 35.72
Nitrogen 31,452 25.88
Oxygen 7,797 6.42
Totals 121,540 100.00



Full Genome
Table: 16
Link and genome info: WOEV01000426.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_134
whole genome shotgun sequence


Nucleotide count: 14,894
'N' Nucleotide Count: 356

Atom Atom Count Percent
Carbon 69,960 32.10
Hydrogen 77,645 35.62
Nitrogen 55,925 25.66
Oxygen 14,433 6.62
Totals 217,963 100.00



Full Genome
Table: 17
Link and genome info: WOEV01000414.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_32
whole genome shotgun sequence


Nucleotide count: 8,639
'N' Nucleotide Count: 283

Atom Atom Count Percent
Carbon 40,607 32.11
Hydrogen 45,016 35.59
Nitrogen 32,556 25.74
Oxygen 8,297 6.56
Totals 126,476 100.00



Full Genome
Table: 18
Link and genome info: WOEV01000416.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_82
whole genome shotgun sequence


Nucleotide count: 9,017
'N' Nucleotide Count: 249

Atom Atom Count Percent
Carbon 41,958 31.99
Hydrogen 46,796 35.68
Nitrogen 33,698 25.69
Oxygen 8,717 6.65
Totals 131,169 100.00



Full Genome
Table: 19
Link and genome info: WOEV01000418.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_24
whole genome shotgun sequence


Nucleotide count: 9,111
'N' Nucleotide Count: 463

Atom Atom Count Percent
Carbon 43,189 32.15
Hydrogen 47,833 35.61
Nitrogen 33,989 25.30
Oxygen 9,332 6.95
Totals 134,343 100.00



Full Genome
Table: 20
Link and genome info: WOEV01000412.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_212
whole genome shotgun sequence


Nucleotide count: 7,177
'N' Nucleotide Count: 305

Atom Atom Count Percent
Carbon 33,339 32.00
Hydrogen 37,168 35.67
Nitrogen 26,944 25.86
Oxygen 6,745 6.47
Totals 104,196 100.00



Grand Totals For The Tables Above:
(Total atom count: 124,457,346,482)

Atom Type Atom Type Count Average
Carbon 40,340,454,919 32.41%
Hydrogen 44,546,428,783 35.79%
Nitrogen 31,153,300,949 25.03%
Oxygen 8,417,161,831 6.76%





Promoter-Terminator Genes
Table: 3 (Gene Count: 1)
Link and genome info: WOEV01000427.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_207
whole genome shotgun sequence


Nucleotide count: 7,723
'N' Nucleotide Count: 335

Atom Atom Count Percent
Carbon 36,554 32.16
Hydrogen 40,586 35.71
Nitrogen 28,580 25.15
Oxygen 7,930 6.98
Totals 113,650 100.00



Promoter-Terminator Genes
Table: 9 (Gene Count: 2)
Link and genome info: WOEV01000417.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_196
whole genome shotgun sequence


Nucleotide count: 3,530
'N' Nucleotide Count: 110

Atom Atom Count Percent
Carbon 16,534 32.09
Hydrogen 18,346 35.61
Nitrogen 13,330 25.87
Oxygen 3,313 6.43
Totals 51,523 100.00



Promoter-Terminator Genes
Table: 13 (Gene Count: 1)
Link and genome info: WOEV01000430.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_192
whole genome shotgun sequence


Nucleotide count: 447
'N' Nucleotide Count: 6

Atom Atom Count Percent
Carbon 2,131 32.33
Hydrogen 2,367 35.91
Nitrogen 1,631 24.75
Oxygen 462 7.01
Totals 6,591 100.00



Promoter-Terminator Genes
Table: 16 (Gene Count: 1)
Link and genome info: WOEV01000426.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_134
whole genome shotgun sequence


Nucleotide count: 9,026
'N' Nucleotide Count: 169

Atom Atom Count Percent
Carbon 42,465 32.11
Hydrogen 47,078 35.60
Nitrogen 33,956 25.68
Oxygen 8,752 6.62
Totals 132,251 100.00



Promoter-Terminator Genes
Table: 19 (Gene Count: 1)
Link and genome info: WOEV01000418.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_24
whole genome shotgun sequence


Nucleotide count: 3,650
'N' Nucleotide Count: 100

Atom Atom Count Percent
Carbon 17,260 32.10
Hydrogen 19,044 35.42
Nitrogen 13,888 25.83
Oxygen 3,570 6.64
Totals 53,762 100.00



Grand Totals For The Tables Above:
(Total Atom count: 1,812,037,898)
Atom Type Atom Type Count Average
Carbon 585,762,157 32.33%
Hydrogen 646,557,606 35.68%
Nitrogen 457,501,086 25.25%
Oxygen 122,217,049 6.74%





Cleaned Genes
Table: 3 (Gene Count: 1)
Link and genome info: WOEV01000427.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_207
whole genome shotgun sequence


Nucleotide count: 7,723
'N' Nucleotide Count: 335

Atom Atom Count Percent
Carbon 36,554 32.16
Hydrogen 40,586 35.71
Nitrogen 28,580 25.15
Oxygen 7,930 6.98
Totals 113,650 100.00



Cleaned Genes
Table: 9 (Gene Count: 2)
Link and genome info: WOEV01000417.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_196
whole genome shotgun sequence


Nucleotide count: 3,530
'N' Nucleotide Count: 110

Atom Atom Count Percent
Carbon 16,534 32.09
Hydrogen 18,346 35.61
Nitrogen 13,330 25.87
Oxygen 3,313 6.43
Totals 51,523 100.00



Cleaned Genes
Table: 13 (Gene Count: 1)
Link and genome info: WOEV01000430.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_192
whole genome shotgun sequence


Nucleotide count: 447
'N' Nucleotide Count: 6

Atom Atom Count Percent
Carbon 2,131 32.33
Hydrogen 2,367 35.91
Nitrogen 1,631 24.75
Oxygen 462 7.01
Totals 6,591 100.00



Cleaned Genes
Table: 16 (Gene Count: 1)
Link and genome info: WOEV01000426.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_134
whole genome shotgun sequence


Nucleotide count: 9,026
'N' Nucleotide Count: 169

Atom Atom Count Percent
Carbon 42,465 32.11
Hydrogen 47,078 35.60
Nitrogen 33,956 25.68
Oxygen 8,752 6.62
Totals 132,251 100.00



Cleaned Genes
Table: 19 (Gene Count: 1)
Link and genome info: WOEV01000418.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_24
whole genome shotgun sequence


Nucleotide count: 3,650
'N' Nucleotide Count: 100

Atom Atom Count Percent
Carbon 17,260 32.10
Hydrogen 19,044 35.42
Nitrogen 13,888 25.83
Oxygen 3,570 6.64
Totals 53,762 100.00



Grand Totals For The Tables Above:
(Total Atom count: 1,812,011,100)
Atom Type Atom Type Count Average
Carbon 585,753,663 32.33%
Hydrogen 646,547,150 35.68%
Nitrogen 457,495,846 25.25%
Oxygen 122,214,441 6.74%

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