Friday, August 4, 2023

APPDX Chimera 008

This is an appendix to: Chimera Detection






Full Genome
Table: 1
Link and genome info: WOEV01000387.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_105
whole genome shotgun sequence


Nucleotide count: 3,020
'N' Nucleotide Count: 59

Atom Atom Count Percent
Carbon 14,054 32.02
Hydrogen 15,676 35.72
Nitrogen 11,280 25.70
Oxygen 2,880 6.56
Totals 43,890 100.00



Full Genome
Table: 2
Link and genome info: WOEV01000402.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_210
whole genome shotgun sequence


Nucleotide count: 4,081
'N' Nucleotide Count: 287

Atom Atom Count Percent
Carbon 19,057 32.04
Hydrogen 21,186 35.62
Nitrogen 15,366 25.84
Oxygen 3,861 6.49
Totals 59,470 100.00



Full Genome
Table: 3
Link and genome info: WOEV01000379.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_311
whole genome shotgun sequence


Nucleotide count: 2,480
'N' Nucleotide Count: 79

Atom Atom Count Percent
Carbon 11,751 32.10
Hydrogen 12,976 35.45
Nitrogen 9,374 25.61
Oxygen 2,502 6.84
Totals 36,603 100.00



Full Genome
Table: 4
Link and genome info: WOEV01000383.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_629
whole genome shotgun sequence


Nucleotide count: 2,772
'N' Nucleotide Count: 35

Atom Atom Count Percent
Carbon 13,021 32.16
Hydrogen 14,485 35.77
Nitrogen 10,307 25.45
Oxygen 2,679 6.62
Totals 40,492 100.00



Full Genome
Table: 5
Link and genome info: WOEV01000386.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_74
whole genome shotgun sequence


Nucleotide count: 2,990
'N' Nucleotide Count: 42

Atom Atom Count Percent
Carbon 14,187 32.18
Hydrogen 15,681 35.56
Nitrogen 11,231 25.47
Oxygen 2,993 6.79
Totals 44,092 100.00



Full Genome
Table: 6
Link and genome info: WOEV01000376.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_604
whole genome shotgun sequence


Nucleotide count: 2,269
'N' Nucleotide Count: 125

Atom Atom Count Percent
Carbon 10,818 32.03
Hydrogen 11,883 35.18
Nitrogen 8,677 25.69
Oxygen 2,395 7.09
Totals 33,773 100.00



Full Genome
Table: 7
Link and genome info: WOEV01000407.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_682
whole genome shotgun sequence


Nucleotide count: 5,273
'N' Nucleotide Count: 138

Atom Atom Count Percent
Carbon 25,727 32.77
Hydrogen 28,229 35.96
Nitrogen 19,497 24.84
Oxygen 5,044 6.43
Totals 78,497 100.00



Full Genome
Table: 8
Link and genome info: WOEV01000394.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_183
whole genome shotgun sequence


Nucleotide count: 3,252
'N' Nucleotide Count: 175

Atom Atom Count Percent
Carbon 15,495 32.04
Hydrogen 17,030 35.21
Nitrogen 12,420 25.68
Oxygen 3,417 7.07
Totals 48,362 100.00



Full Genome
Table: 9
Link and genome info: WOEV01000395.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_431
whole genome shotgun sequence


Nucleotide count: 3,413
'N' Nucleotide Count: 112

Atom Atom Count Percent
Carbon 16,165 32.19
Hydrogen 17,905 35.66
Nitrogen 12,745 25.38
Oxygen 3,398 6.77
Totals 50,213 100.00



Full Genome
Table: 10
Link and genome info: WOEV01000382.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_543
whole genome shotgun sequence


Nucleotide count: 2,727
'N' Nucleotide Count: 43

Atom Atom Count Percent
Carbon 12,829 32.15
Hydrogen 14,249 35.70
Nitrogen 10,181 25.51
Oxygen 2,649 6.64
Totals 39,908 100.00



Full Genome
Table: 11
Link and genome info: WOEV01000396.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_67
whole genome shotgun sequence


Nucleotide count: 3,384
'N' Nucleotide Count: 186

Atom Atom Count Percent
Carbon 15,992 32.04
Hydrogen 17,592 35.25
Nitrogen 13,048 26.14
Oxygen 3,280 6.57
Totals 49,912 100.00



Full Genome
Table: 12
Link and genome info: WOEV01000405.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_138
whole genome shotgun sequence


Nucleotide count: 5,110
'N' Nucleotide Count: 136

Atom Atom Count Percent
Carbon 24,281 32.20
Hydrogen 26,788 35.52
Nitrogen 19,298 25.59
Oxygen 5,044 6.69
Totals 75,411 100.00



Full Genome
Table: 13
Link and genome info: WOEV01000375.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_205
whole genome shotgun sequence


Nucleotide count: 2,270
'N' Nucleotide Count: 107

Atom Atom Count Percent
Carbon 10,718 32.19
Hydrogen 11,872 35.65
Nitrogen 8,520 25.59
Oxygen 2,188 6.57
Totals 33,298 100.00



Full Genome
Table: 14
Link and genome info: WOEV01000374.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_659
whole genome shotgun sequence


Nucleotide count: 2,262
'N' Nucleotide Count: 114

Atom Atom Count Percent
Carbon 10,650 32.09
Hydrogen 11,804 35.56
Nitrogen 8,508 25.63
Oxygen 2,231 6.72
Totals 33,193 100.00



Full Genome
Table: 15
Link and genome info: WOEV01000389.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_193
whole genome shotgun sequence


Nucleotide count: 3,173
'N' Nucleotide Count: 79

Atom Atom Count Percent
Carbon 14,917 32.10
Hydrogen 16,554 35.62
Nitrogen 11,902 25.61
Oxygen 3,098 6.67
Totals 46,471 100.00



Full Genome
Table: 16
Link and genome info: WOEV01000403.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_137
whole genome shotgun sequence


Nucleotide count: 4,234
'N' Nucleotide Count: 153

Atom Atom Count Percent
Carbon 19,782 32.08
Hydrogen 22,061 35.78
Nitrogen 15,721 25.50
Oxygen 4,097 6.64
Totals 61,661 100.00



Full Genome
Table: 17
Link and genome info: WOEV01000377.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_99
whole genome shotgun sequence


Nucleotide count: 2,358
'N' Nucleotide Count: 61

Atom Atom Count Percent
Carbon 11,081 32.10
Hydrogen 12,288 35.60
Nitrogen 8,878 25.72
Oxygen 2,271 6.58
Totals 34,518 100.00



Full Genome
Table: 18
Link and genome info: WOEV01000392.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_465
whole genome shotgun sequence


Nucleotide count: 3,307
'N' Nucleotide Count: 88

Atom Atom Count Percent
Carbon 15,552 32.11
Hydrogen 17,211 35.53
Nitrogen 12,541 25.89
Oxygen 3,134 6.47
Totals 48,438 100.00



Full Genome
Table: 19
Link and genome info: WOEV01000393.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_190
whole genome shotgun sequence


Nucleotide count: 3,297
'N' Nucleotide Count: 111

Atom Atom Count Percent
Carbon 15,466 32.06
Hydrogen 17,149 35.55
Nitrogen 12,455 25.82
Oxygen 3,173 6.58
Totals 48,243 100.00



Full Genome
Table: 20
Link and genome info: WOEV01000400.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_49
whole genome shotgun sequence


Nucleotide count: 3,787
'N' Nucleotide Count: 225

Atom Atom Count Percent
Carbon 18,065 32.04
Hydrogen 19,824 35.16
Nitrogen 14,528 25.76
Oxygen 3,971 7.04
Totals 56,388 100.00



Full Genome
Table: 21
Link and genome info: WOEV01000388.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_336
whole genome shotgun sequence


Nucleotide count: 3,146
'N' Nucleotide Count: 60

Atom Atom Count Percent
Carbon 14,841 32.05
Hydrogen 16,484 35.60
Nitrogen 11,690 25.25
Oxygen 3,288 7.10
Totals 46,303 100.00



Full Genome
Table: 22
Link and genome info: WOEV01000380.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_302
whole genome shotgun sequence


Nucleotide count: 2,515
'N' Nucleotide Count: 96

Atom Atom Count Percent
Carbon 11,764 32.09
Hydrogen 13,116 35.78
Nitrogen 9,330 25.45
Oxygen 2,444 6.67
Totals 36,654 100.00



Full Genome
Table: 23
Link and genome info: WOEV01000404.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_199
whole genome shotgun sequence


Nucleotide count: 4,921
'N' Nucleotide Count: 230

Atom Atom Count Percent
Carbon 22,999 32.05
Hydrogen 25,514 35.56
Nitrogen 18,666 26.01
Oxygen 4,573 6.37
Totals 71,752 100.00



Full Genome
Table: 24
Link and genome info: WOEV01000410.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_139
whole genome shotgun sequence


Nucleotide count: 5,460
'N' Nucleotide Count: 297

Atom Atom Count Percent
Carbon 25,993 32.23
Hydrogen 28,779 35.69
Nitrogen 20,249 25.11
Oxygen 5,621 6.97
Totals 80,642 100.00



Full Genome
Table: 25
Link and genome info: WOEV01000390.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_29
whole genome shotgun sequence


Nucleotide count: 3,256
'N' Nucleotide Count: 53

Atom Atom Count Percent
Carbon 15,528 32.09
Hydrogen 17,099 35.34
Nitrogen 12,319 25.46
Oxygen 3,438 7.11
Totals 48,384 100.00



Full Genome
Table: 26
Link and genome info: WOEV01000399.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_573
whole genome shotgun sequence


Nucleotide count: 3,832
'N' Nucleotide Count: 162

Atom Atom Count Percent
Carbon 17,981 32.04
Hydrogen 19,973 35.59
Nitrogen 14,363 25.59
Oxygen 3,802 6.77
Totals 56,119 100.00



Full Genome
Table: 27
Link and genome info: WOEV01000385.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_318
whole genome shotgun sequence


Nucleotide count: 2,899
'N' Nucleotide Count: 19

Atom Atom Count Percent
Carbon 13,644 32.13
Hydrogen 15,151 35.68
Nitrogen 10,825 25.49
Oxygen 2,845 6.70
Totals 42,465 100.00



Full Genome
Table: 28
Link and genome info: WOEV01000406.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_140
whole genome shotgun sequence


Nucleotide count: 5,136
'N' Nucleotide Count: 253

Atom Atom Count Percent
Carbon 24,398 32.06
Hydrogen 26,808 35.22
Nitrogen 19,732 25.92
Oxygen 5,174 6.80
Totals 76,112 100.00



Full Genome
Table: 29
Link and genome info: WOEV01000401.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_186
whole genome shotgun sequence


Nucleotide count: 4,093
'N' Nucleotide Count: 105

Atom Atom Count Percent
Carbon 19,389 32.23
Hydrogen 21,438 35.63
Nitrogen 15,394 25.59
Oxygen 3,940 6.55
Totals 60,161 100.00



Full Genome
Table: 30
Link and genome info: WOEV01000373.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_496
whole genome shotgun sequence


Nucleotide count: 2,347
'N' Nucleotide Count: 27

Atom Atom Count Percent
Carbon 11,076 32.07
Hydrogen 12,251 35.47
Nitrogen 8,869 25.68
Oxygen 2,345 6.79
Totals 34,541 100.00



Full Genome
Table: 31
Link and genome info: WOEV01000384.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_28
whole genome shotgun sequence


Nucleotide count: 2,787
'N' Nucleotide Count: 56

Atom Atom Count Percent
Carbon 13,274 32.11
Hydrogen 14,609 35.34
Nitrogen 10,591 25.62
Oxygen 2,862 6.92
Totals 41,336 100.00



Full Genome
Table: 32
Link and genome info: WOEV01000372.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_206
whole genome shotgun sequence


Nucleotide count: 2,123
'N' Nucleotide Count: 238

Atom Atom Count Percent
Carbon 9,921 32.02
Hydrogen 11,038 35.63
Nitrogen 7,958 25.69
Oxygen 2,065 6.67
Totals 30,982 100.00



Full Genome
Table: 33
Link and genome info: WOEV01000381.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_27
whole genome shotgun sequence


Nucleotide count: 2,558
'N' Nucleotide Count: 71

Atom Atom Count Percent
Carbon 12,141 32.17
Hydrogen 13,379 35.45
Nitrogen 9,725 25.77
Oxygen 2,499 6.62
Totals 37,744 100.00



Full Genome
Table: 34
Link and genome info: WOEV01000408.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_136
whole genome shotgun sequence


Nucleotide count: 5,411
'N' Nucleotide Count: 77

Atom Atom Count Percent
Carbon 25,397 32.10
Hydrogen 28,183 35.62
Nitrogen 20,355 25.72
Oxygen 5,191 6.56
Totals 79,126 100.00



Full Genome
Table: 35
Link and genome info: WOEV01000409.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_132
whole genome shotgun sequence


Nucleotide count: 1,663
'N' Nucleotide Count: 4,078

Atom Atom Count Percent
Carbon 7,799 32.05
Hydrogen 8,651 35.55
Nitrogen 6,275 25.79
Oxygen 1,607 6.60
Totals 24,332 100.00



Full Genome
Table: 36
Link and genome info: WOEV01000378.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_100
whole genome shotgun sequence


Nucleotide count: 132
'N' Nucleotide Count: 2,406

Atom Atom Count Percent
Carbon 632 32.08
Hydrogen 691 35.08
Nitrogen 511 25.94
Oxygen 136 6.90
Totals 1,970 100.00



Full Genome
Table: 37
Link and genome info: WOEV01000398.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_499
whole genome shotgun sequence


Nucleotide count: 3,800
'N' Nucleotide Count: 85

Atom Atom Count Percent
Carbon 17,846 32.14
Hydrogen 19,818 35.69
Nitrogen 14,238 25.64
Oxygen 3,622 6.52
Totals 55,524 100.00



Full Genome
Table: 38
Link and genome info: WOEV01000391.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_564
whole genome shotgun sequence


Nucleotide count: 3,301
'N' Nucleotide Count: 88

Atom Atom Count Percent
Carbon 15,536 32.07
Hydrogen 17,245 35.60
Nitrogen 12,347 25.49
Oxygen 3,318 6.85
Totals 48,446 100.00



Full Genome
Table: 39
Link and genome info: WOEV01000397.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_169
whole genome shotgun sequence


Nucleotide count: 3,323
'N' Nucleotide Count: 427

Atom Atom Count Percent
Carbon 15,777 32.24
Hydrogen 17,579 35.92
Nitrogen 12,047 24.61
Oxygen 3,540 7.23
Totals 48,943 100.00



Grand Totals For The Tables Above:
(Total atom count: 124,454,297,198)

Atom Type Atom Type Count Average
Carbon 40,339,476,111 32.41%
Hydrogen 44,545,344,940 35.79%
Nitrogen 31,152,520,062 25.03%
Oxygen 8,416,956,085 6.76%





Promoter-Terminator Genes
Table: 21 (Gene Count: 1)
Link and genome info: WOEV01000388.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_336
whole genome shotgun sequence


Nucleotide count: 1,550
'N' Nucleotide Count: 8

Atom Atom Count Percent
Carbon 7,306 32.05
Hydrogen 8,141 35.72
Nitrogen 5,689 24.96
Oxygen 1,658 7.27
Totals 22,794 100.00



Promoter-Terminator Genes
Table: 29 (Gene Count: 1)
Link and genome info: WOEV01000401.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_186
whole genome shotgun sequence


Nucleotide count: 299

Atom Atom Count Percent
Carbon 1,426 32.26
Hydrogen 1,562 35.34
Nitrogen 1,156 26.15
Oxygen 276 6.24
Totals 4,420 100.00



Grand Totals For The Tables Above:
(Total Atom count: 1,811,680,121)
Atom Type Atom Type Count Average
Carbon 585,647,213 32.33%
Hydrogen 646,430,185 35.68%
Nitrogen 457,409,701 25.25%
Oxygen 122,193,022 6.74%





Cleaned Genes
Table: 21 (Gene Count: 1)
Link and genome info: WOEV01000388.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_336
whole genome shotgun sequence


Nucleotide count: 1,550
'N' Nucleotide Count: 8

Atom Atom Count Percent
Carbon 7,306 32.05
Hydrogen 8,141 35.72
Nitrogen 5,689 24.96
Oxygen 1,658 7.27
Totals 22,794 100.00



Cleaned Genes
Table: 29 (Gene Count: 1)
Link and genome info: WOEV01000401.1
Toxoplasma gondii strain TR01 Toxoplasma_gondii_Ankara_1973_186
whole genome shotgun sequence


Nucleotide count: 299

Atom Atom Count Percent
Carbon 1,426 32.26
Hydrogen 1,562 35.34
Nitrogen 1,156 26.15
Oxygen 276 6.24
Totals 4,420 100.00



Grand Totals For The Tables Above:
(Total Atom count: 1,811,653,323)
Atom Type Atom Type Count Average
Carbon 585,638,719 32.33%
Hydrogen 646,419,729 35.68%
Nitrogen 457,404,461 25.25%
Oxygen 122,190,414 6.74%

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