Monday, January 3, 2022

Appendix 77-153

This is an appendix to: The Epigenetics of Viruses



Pattern '77':
(">=<<=<<=<<=<<=>>=>>=>>=>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '77' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '78':
("<=<<=<<=<>>>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '78' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: increased (>)
11) Gene 3 length: increased (>)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '79':
(">=>>>>>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 5,109 SARS-CoV-2 viruses.


Pattern '79' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '80':
(">=>>>>>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 459 SARS-CoV-2 viruses.


Pattern '80' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '81':
(">=<>>>>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 11 SARS-CoV-2 viruses.


Pattern '81' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '82':
(">=>>>>>=>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 18 SARS-CoV-2 viruses.


Pattern '82' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '83':
("<=<<=<<><<=<<=<<=<<=<<=<<=<<><<=<<=")
Found in 310 SARS-CoV-2 viruses.


Pattern '83' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '84':
("<<=====================>>>>>>>><<<<")
Found in 28 SARS-CoV-2 viruses.


Pattern '84' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: decreased (<)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '85':
("><=====================>>>>>>>><<<<")
Found in 3 SARS-CoV-2 viruses.


Pattern '85' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: decreased (<)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: decreased (<)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '86':
("<<>>=>>=>>=>>=>>=>>=>>=>>>>>>>><<<<")
Found in 6 SARS-CoV-2 viruses.


Pattern '86' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: decreased (<)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '87':
("><>>=>>=>>=>>=>>=>>=>>=>>>>>>>><<<<")
Found in 19 SARS-CoV-2 viruses.


Pattern '87' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: decreased (<)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: decreased (<)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '88':
("><>>>>>=>>=>>=>>=>>=>>=>>>>>>>><<<<")
Found in 12 SARS-CoV-2 viruses.


Pattern '88' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: decreased (<)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: decreased (<)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '89':
("><<>>>>=>>=>>=>>=>>=>>=>>>>>>>><<<<")
Found in 1 SARS-CoV-2 virus.


Pattern '89' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: decreased (<)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: decreased (<)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '90':
("<<<<=<<=<<=<<=<<=<<=<<=<<=<<=<<=<<<")
Found in 84 SARS-CoV-2 viruses.


Pattern '90' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '91':
("<<<<=>><>><>><>>>>><>>>>><>>>>>><<<<<<")
Found in 1 SARS-CoV-2 virus.


Pattern '91' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: decreased (<)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: decreased (<)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: increased (>)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: decreased (<)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: decreased (<)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)

36) Gene 12 begins: decreased (<)
37) Gene 12 ends: decreased (<)
38) Gene 12 length: decreased (<)



Pattern '92':
("><>>=>>=>>=>>=>>=>>=>>=>>=>>=>>=<<<")
Found in 7 SARS-CoV-2 viruses.


Pattern '92' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: decreased (<)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '93':
("<<>>=>>=>>=>>=>>=>>=>>=>>=>>=>>=<<<")
Found in 5 SARS-CoV-2 viruses.


Pattern '93' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '94':
("<<<<=<<=<<=<<=<<=<<=<<=<<=<<<<<=<<<")
Found in 1 SARS-CoV-2 virus.


Pattern '94' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '95':
("<<<<><<=<<=<<=<<=<<=<<=<<=<<=<<=<<<")
Found in 1 SARS-CoV-2 virus.


Pattern '95' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: decreased (<)



Pattern '96':
(">=======================>>>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '96' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '97':
(">==>>>>>>>=>>=>>=>>>>>=>>=>>=>>>>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '97' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: increased (>)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '98':
("<=<<=<<=<<=<<=<<=<<=<<=<<=<>><<=<<=")
Found in 7 SARS-CoV-2 viruses.


Pattern '98' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '99':
("<=<>>>>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 258 SARS-CoV-2 viruses.


Pattern '99' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '100':
(">=<>>>>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 215 SARS-CoV-2 viruses.


Pattern '100' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '101':
("<=<>>>>=>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '101' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '102':
(">=>>>>>=>>=>>=>>>>>=>>=>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '102' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: increased (>)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '103':
(">=>>>>>>>>=>>=>>=>>>>>=>>=>>=>>>>>=")
Found in 196 SARS-CoV-2 viruses.


Pattern '103' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: increased (>)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '104':
("<=<<=<>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 9 SARS-CoV-2 viruses.


Pattern '104' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '105':
("<=<<=<<=<=><<=<<=<<=<<=<<=<<=<<=<<=")
Found in 2 SARS-CoV-2 viruses.


Pattern '105' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: no change (=)
11) Gene 3 length: increased (>)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '106':
("<=<<><<><<=<<=<<=<<><<=<<=<<=<=>===")
Found in 1 SARS-CoV-2 virus.


Pattern '106' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: increased (>)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: no change (=)
32) Gene 10 length: increased (>)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '107':
("<=<<=<<=<<=<<=<<=<<=<<=<<=<<<<<=<<=")
Found in 19 SARS-CoV-2 viruses.


Pattern '107' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '108':
(">===========>>>>=>>=>>=>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '108' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: increased (>)
14) Gene 4 length: increased (>)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '109':
("<=<<><<><<=<<=<<=<<=<<=<<=<>><<=<<=")
Found in 2,059 SARS-CoV-2 viruses.


Pattern '109' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '110':
(">=<<><=>==========>>>>=>>=>>=>>>>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '110' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: no change (=)
8) Gene 2 length: increased (>)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: increased (>)
20) Gene 6 length: increased (>)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '111':
("<=<<><<><<=<<=<<=<<><<=<<=<<=<<><<=")
Found in 11 SARS-CoV-2 viruses.


Pattern '111' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: increased (>)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: increased (>)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '112':
("<=<>>>>=>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 242 SARS-CoV-2 viruses.


Pattern '112' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '113':
(">=<<><<><<=<<=<<=<<><<=<<=<<=<>>>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '113' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: increased (>)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '114':
("<=<<><<><<=<<=<<=<<=<<><<=<>>======")
Found in 1 SARS-CoV-2 virus.


Pattern '114' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: no change (=)
31) Gene 10 ends: no change (=)
32) Gene 10 length: no change (=)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '115':
("<=<<><<><<=<<=<<=<<=<<=<<=<>>======")
Found in 54 SARS-CoV-2 viruses.


Pattern '115' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: no change (=)
31) Gene 10 ends: no change (=)
32) Gene 10 length: no change (=)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '116':
("<=<<><>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 272 SARS-CoV-2 viruses.


Pattern '116' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '117':
("<=<<><=>===================>>>>=>>=")
Found in 22 SARS-CoV-2 viruses.


Pattern '117' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: no change (=)
8) Gene 2 length: increased (>)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '118':
(">=<<><<><<=<<=<<=<<><<=<<=<<=<<><<=")
Found in 5 SARS-CoV-2 viruses.


Pattern '118' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: increased (>)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: increased (>)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '119':
("<=<<=<<=<<=<<=<<=<<=<>><<=<<=<<=<<=")
Found in 4 SARS-CoV-2 viruses.


Pattern '119' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '120':
("<=<<><<=<<=<<=<<=<<=<<=<<=<>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '120' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '121':
("<=<<=<<=<<=<<=<<=<<=<<=<<=<>>>>=>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '121' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '122':
("<=<<><<><<=<<=<<=<<=<>>>>=>>>>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '122' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '123':
("<=<<><>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 42 SARS-CoV-2 viruses.


Pattern '123' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '124':
("<=<<><<=<<=<<=<<=<<=<<=<<=<<<<<=<<=")
Found in 5 SARS-CoV-2 viruses.


Pattern '124' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '125':
("<=<<><<><<=<<=<<=<<=<<=<<=<<<<<=<<=")
Found in 3 SARS-CoV-2 viruses.


Pattern '125' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '126':
(">=<<><<><<=<<=<<=<<><<=<<=<<=<=>===")
Found in 2 SARS-CoV-2 viruses.


Pattern '126' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: increased (>)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: no change (=)
32) Gene 10 length: increased (>)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '127':
(">==>>>>=>>=>>=>>=>>=>>=>>=><<>>=>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '127' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '128':
(">=<<><>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 251 SARS-CoV-2 viruses.


Pattern '128' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '129':
("<============================<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '129' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '130':
("<=<<><<=<<=<<=<<=<<<<<=<<=<<=<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '130' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: decreased (<)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '131':
(">==>>>>>>>=>>=>>=>>=>>=>>=><<>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '131' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '132':
("<=<<><<><<=<<=<<=<<=<<><<=<>><<=<<=")
Found in 4 SARS-CoV-2 viruses.


Pattern '132' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '133':
(">=<<><<=<<=<<=<<=<<=<<=<<=<<=<<=<<=")
Found in 72 SARS-CoV-2 viruses.


Pattern '133' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '134':
("<=<<><<=<<=<<=<<=<<=<<><<=<<=<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '134' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '135':
("==<<><>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 44 SARS-CoV-2 viruses.


Pattern '135' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '136':
("<=<<><<=<<=<<=<<=<<=<<=<<=<<=<<><<=")
Found in 1 SARS-CoV-2 virus.


Pattern '136' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: increased (>)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '137':
("<=<<><<><<=<<=<<=<<=<<=<<=<>>>>=>>=")
Found in 5 SARS-CoV-2 viruses.


Pattern '137' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '138':
("<=<<><<><<=<<=<<=<<=<<=<<><<=<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '138' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: increased (>)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '139':
(">=<<><>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '139' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '140':
("<=<=>========================<<=<<=")
Found in 6 SARS-CoV-2 viruses.


Pattern '140' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '141':
(">=<<><<><<=<<=<<=<<=<<=<<=<<=<<=<<=")
Found in 3 SARS-CoV-2 viruses.


Pattern '141' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '142':
(">=<=>=>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 8 SARS-CoV-2 viruses.


Pattern '142' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '143':
(">=<<><<><=>==================>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '143' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: no change (=)
11) Gene 3 length: increased (>)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '144':
("<=<<=<<><<=<<=<<=<<=<>>>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '144' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '145':
("<=<<=<<><<=<<=<<=<<=<<=<<=<<<>>=>>=")
Found in 7 SARS-CoV-2 viruses.


Pattern '145' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '146':
(">=<=>=>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 4 SARS-CoV-2 viruses.


Pattern '146' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '147':
("<=<<><<><<><<=<<=<<=<<=<<=<<=<<=<<=")
Found in 2 SARS-CoV-2 viruses.


Pattern '147' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: increased (>)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '148':
("<=<<=<<><<=<<=<<=<<=<<=<<=<<<<<=<<=")
Found in 8 SARS-CoV-2 viruses.


Pattern '148' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '149':
(">=<<=<<><<=<<=<<=<<=<<=<<=<<<<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '149' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '150':
("<=<<=<<><<=<<=<<=<<=<<=<<=<=>>>=>>=")
Found in 142 SARS-CoV-2 viruses.


Pattern '150' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: no change (=)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '151':
(">=<<=<<><<=<<=<<=<<=<<=<<=<=>>>=>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '151' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: no change (=)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '152':
("<=<<=<<><<><<=<<=<<=<<=<<=<<><<=<<=")
Found in 3 SARS-CoV-2 viruses.


Pattern '152' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: increased (>)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '153':
("<=<<><<><<=<<=<<=<<=<<=<<=<<><<=<<=")
Found in 25 SARS-CoV-2 viruses.


Pattern '153' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)

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