Monday, January 3, 2022

Appendix 154-230

This is an appendix to: The Epigenetics of Viruses



Pattern '154':
(">=====>>>><>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 6 SARS-CoV-2 viruses.


Pattern '154' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '155':
("<=<<=<<><<=<<=<<=<<=<<><<=<>>>>=>>=")
 Found in 1 SARS-CoV-2 virus.


Pattern '155' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '156':
(">=<<=<<><<=<<=<<=<<=<<=<<=<>>>>=>>=")
Found in 28 SARS-CoV-2 viruses.


Pattern '156' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '157':
("<=<<=<<><<<<<=<<=<<=<<=<<=<<><<=<<=")
Found in 4 SARS-CoV-2 viruses.


Pattern '157' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '158':
("==<<=<<><<=<<=<<=<<=<<=<<=<=>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '158' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: no change (=)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '159':
(">=====>>>>=>>=>>=>>=>>=>>>>>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '159' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '160':
(">=<<=<<><<=<<=<<=<<=<<=<<=<<><<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '160' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '161':
("<=<<><<><<<<<=<<=<<=<<=<<=<<><<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '161' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '162':
("<=<<=<<><<=<<=<<=<<=<<=<<><<><<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '162' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: increased (>)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '163':
("<=<<=<<><<=<<=<<=<<=<<><<=<<><<=<<=")
Found in 3 SARS-CoV-2 viruses.


Pattern '163' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '164':
(">=====>>>>=>>=>>=>>=>>>>>=>>>>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '164' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '165':
("<=<<><<><<=<<=<<=<<=<<=<<=<<=<<><<=")
Found in 1 SARS-CoV-2 virus.


Pattern '165' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: increased (>)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '166':
(">=<=>=>>>>=>>=>>=>>=>>=>>=>>=>>>>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '166' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '167':
("<=<<=<<<<<=<<=<<=<<=<<=<<=<<=<<=<<=")
Found in 21 SARS-CoV-2 viruses.


Pattern '167' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: decreased (<)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '168':
("<=<=>=>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 226 SARS-CoV-2 viruses.


Pattern '168' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '169':
("<=<>>>>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 62 SARS-CoV-2 viruses.


Pattern '169' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '170':
(">=<<><<><<=<<=<<=<<=<<=<<=<>><<=<<=")
Found in 41 SARS-CoV-2 viruses.


Pattern '170' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '171':
("<=<<=<<><<=<<=<<=<<=<<=<<=<>><<=<<=")
Found in 3 SARS-CoV-2 viruses.


Pattern '171' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '172':
(">=<<><<><<=<<=<<=<<=<<><<=<>><<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '172' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '173':
("=====================>>============")
Found in 1 SARS-CoV-2 virus.


Pattern '173' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: no change (=)
31) Gene 10 ends: no change (=)
32) Gene 10 length: no change (=)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '174':
(">==========================<<>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '174' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '175':
(">=============>>=>>=>>=>>=>>=>>=>>=")
 

Found in 1 SARS-CoV-2 virus.


Pattern '175' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '176':
(">=>>=>>=>>=>>=>>=>>=>><>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '176' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: decreased (<)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '177':
("==>>=>>=>>=>>=>>=>>=>=<============")
Found in 1 SARS-CoV-2 virus.


Pattern '177' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: no change (=)
23) Gene 7 length: decreased (<)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: no change (=)
31) Gene 10 ends: no change (=)
32) Gene 10 length: no change (=)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '178':
(">=>>>>>>>>=>>=>>=>>=>>=>>=>><>>=>>=")
Found in 28 SARS-CoV-2 viruses.


Pattern '178' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '179':
(">=>>>>>>>>>>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 5 SARS-CoV-2 viruses.


Pattern '179' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: increased (>)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '180':
(">=>>>>>>>>=>>=>>=>>=>>=>>=>>>>>>>>=")
Found in 5 SARS-CoV-2 viruses.


Pattern '180' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '181':
(">=>>>>>=>>=>>=>>=>>=>>=>>=>><>>=>>=")
Found in 14 SARS-CoV-2 viruses.


Pattern '181' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '182':
(">=>>>>>>>>=>>=>>=>>=>>>>>=>>>>>=>>=")
Found in 39 SARS-CoV-2 viruses.


Pattern '182' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '183':
(">=>>>>>=>>=>>=>>=>>=>>>>>=>>=>>=>>=")
Found in 4 SARS-CoV-2 viruses.


Pattern '183' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '184':
(">=>>>>>=>>=>>=>>=>>=>>=>>>>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '184' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: increased (>)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '185':
(">=>>>>>=>>=>>=>>=>>=>>=>>=>>=>>>>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '185' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '186':
(">=>>>>>>>>=>>=>>=>>=>>=>>=>>>>><>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '186' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: decreased (<)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '187':
(">=>>>>>=>>=>>=>>=>>>>>=>>=>>=>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '187' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: increased (>)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '188':
(">=>>>>>>>><>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 5 SARS-CoV-2 viruses.


Pattern '188' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '189':
(">=>>=>>>>>=>>=>>=>>=>>>>>=>>=>>=>>=")
Found in 7 SARS-CoV-2 viruses.


Pattern '189' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '190':
(">=====>>>>=>>=>>=>>=>>>>>=>>=>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '190' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '191':
(">=>>=>>>>>=>>=>>=>>=>>=>>=>><>>=>>=")
Found in 21 SARS-CoV-2 viruses.


Pattern '191' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '192':
(">=>>>>>>>>=>>=>>=>>=>>>>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '192' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '193':
(">=>><>>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '193' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: decreased (<)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '194':
(">=>>=>>>>>=>>=>>=>>=>>>>>=>>>>>=>>=")
Found in 22 SARS-CoV-2 viruses.


Pattern '194' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '195':
(">=>>=>>>>><>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 7 SARS-CoV-2 viruses.


Pattern '195' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '196':
(">=>>=>>>>>>>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 5 SARS-CoV-2 viruses.


Pattern '196' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: increased (>)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '197':
(">=====>>>>=>>=>>=>>>>>=>>=>>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '197' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: increased (>)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '198':
(">=>>=>>>>>=>>=>>=>>=>>=>><>>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '198' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: decreased (<)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '199':
(">=>>=>>>>>=>>=>>=>>=>>=>>=>>>>>>>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '199' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '200':
(">=====>>>>>>>=>>=>>=>>>>>=>>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '200' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: increased (>)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '201':
(">=====>>>>>>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '201' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: no change (=)
5) Gene 1 length: no change (=)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: increased (>)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '202':
("<=<<><<><<=<<=<<=<<=<>><<=<>><<=<<=")
Found in 13 SARS-CoV-2 viruses.


Pattern '202' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '203':
("<=<<=<<=<<=<<=<<=<<><<=<<=<<=<<=<<=")
Found in 4 SARS-CoV-2 viruses.


Pattern '203' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: increased (>)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '204':
("<=<<><>>>>=>>=>>=>>=>>>>>=>>>>>=>>=")
Found in 12 SARS-CoV-2 viruses.


Pattern '204' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '205':
("<=<<><<=<<=<<=<<=<<=<<=<<=<>><<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '205' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '206':
(">=<<=<<=<<=<<=<<=<<=<<=<<=<>><<=<<=")
Found in 9 SARS-CoV-2 viruses.


Pattern '206' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '207':
("<=<>><<><<=<<=<<=<<=<<=<<=<<=<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '207' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '208':
("<=<<><<=<<<<<=<<=<<=<<=<<=<<=<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '208' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '209':
("<=<<=<<=<<<<<=<<=<<><<=<<=<<=<<=<<=")
Found in 1 SARS-CoV-2 virus.


Pattern '209' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: increased (>)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '210':
("<=>>=>>=>>>>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '210' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: increased (>)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '211':
(">=<<><>>>>=>>=>>=>>>>>=>>=>>=>>>>>=")
Found in 3 SARS-CoV-2 viruses.


Pattern '211' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: increased (>)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '212':
(">=<<><<><<=<<=<<=<>>>>=>>=>>=>>>>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '212' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: increased (>)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: increased (>)
20) Gene 6 length: increased (>)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '213':
("<==<<<<=<<=<<=<<=<<=<<=<<=<<=<<=<<=")
Found in 12 SARS-CoV-2 viruses.


Pattern '213' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: decreased (<)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: decreased (<)
31) Gene 10 ends: decreased (<)
32) Gene 10 length: no change (=)

33) Gene 11 begins: decreased (<)
34) Gene 11 ends: decreased (<)
35) Gene 11 length: no change (=)



Pattern '214':
("<<<>>>><>><>><>>>>><>>>>><>>>>>>>><<<<")
Found in 8 SARS-CoV-2 viruses.


Pattern '214' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: decreased (<)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: decreased (<)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: decreased (<)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: decreased (<)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: increased (>)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: decreased (<)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: decreased (<)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: increased (>)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: decreased (<)

36) Gene 12 begins: decreased (<)
37) Gene 12 ends: decreased (<)
38) Gene 12 length: decreased (<)



Pattern '215':
(">=>>=>>=>>=>>=>>=>>=>>=>>=><<>>=>>=")
Found in 21 SARS-CoV-2 viruses.


Pattern '215' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: no change (=)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '216':
("<=<=>========================>>=>>=")
Found in 134 SARS-CoV-2 viruses.


Pattern '216' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '217':
("<==>>>>=>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 10 SARS-CoV-2 viruses.


Pattern '217' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: no change (=)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '218':
("==<>>>>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '218' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '219':
(">=>><>>=>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 11 SARS-CoV-2 viruses.


Pattern '219' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: decreased (<)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '220':
("<=<=>=>>>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 50 SARS-CoV-2 viruses.


Pattern '220' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '221':
("==<>>>>=>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 2 SARS-CoV-2 viruses.


Pattern '221' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '222':
("<=<<=<<=<<=<<=<<=<<=<<=<<=<<=======")
Found in 2 SARS-CoV-2 viruses.


Pattern '222' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: no change (=)
31) Gene 10 ends: no change (=)
32) Gene 10 length: no change (=)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '223':
("==<>>>>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 30 SARS-CoV-2 viruses.


Pattern '223' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '224':
("==>>>>>=>>=>>=>>=>>=>>=>>=>>=>>=>>=")
Found in 20 SARS-CoV-2 viruses.


Pattern '224' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: increased (>)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '225':
("==<=>=>>>>=>>=>>=>>=>>=>>=>>>>>=>>=")
Found in 1 SARS-CoV-2 virus.


Pattern '225' positions:

1) Nucleotide Length: no change (=)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: increased (>)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '226':
("<=<<><<=<<=<<=<<=<<=<<=<<=<<=======")
Found in 28 SARS-CoV-2 viruses.


Pattern '226' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: increased (>)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: decreased (<)
23) Gene 7 length: no change (=)

24) Gene 8 begins: decreased (<)
25) Gene 8 ends: decreased (<)
26) Gene 8 length: no change (=)

27) Gene 9 begins: decreased (<)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: no change (=)

30) Gene 10 begins: no change (=)
31) Gene 10 ends: no change (=)
32) Gene 10 length: no change (=)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)



Pattern '227':
(">=<=>========================>>=>>=")
Found in 35 SARS-CoV-2 viruses.


Pattern '227' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: no change (=)
5) Gene 1 length: increased (>)

6) Gene 2 begins: no change (=)
7) Gene 2 ends: no change (=)
8) Gene 2 length: no change (=)

9) Gene 3 begins: no change (=)
10) Gene 3 ends: no change (=)
11) Gene 3 length: no change (=)

12) Gene 4 begins: no change (=)
13) Gene 4 ends: no change (=)
14) Gene 4 length: no change (=)

15) Gene 5 begins: no change (=)
16) Gene 5 ends: no change (=)
17) Gene 5 length: no change (=)

18) Gene 6 begins: no change (=)
19) Gene 6 ends: no change (=)
20) Gene 6 length: no change (=)

21) Gene 7 begins: no change (=)
22) Gene 7 ends: no change (=)
23) Gene 7 length: no change (=)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '228':
("<=<>>>>>>>=>>=>>=>>=>>=>>=><<>>=>>=")
Found in 8 SARS-CoV-2 viruses.


Pattern '228' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: increased (>)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: no change (=)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: decreased (<)
29) Gene 9 length: decreased (<)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '229':
(">=<>>>>=>>=>>=>>=>>=>>>>>=>>=>>=>>=")
Found in 1 SARS-CoV-2 virus.

Pattern '229' positions:

1) Nucleotide Length: increased (>)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: increased (>)
5) Gene 1 length: increased (>)

6) Gene 2 begins: increased (>)
7) Gene 2 ends: increased (>)
8) Gene 2 length: no change (=)

9) Gene 3 begins: increased (>)
10) Gene 3 ends: increased (>)
11) Gene 3 length: no change (=)

12) Gene 4 begins: increased (>)
13) Gene 4 ends: increased (>)
14) Gene 4 length: no change (=)

15) Gene 5 begins: increased (>)
16) Gene 5 ends: increased (>)
17) Gene 5 length: no change (=)

18) Gene 6 begins: increased (>)
19) Gene 6 ends: increased (>)
20) Gene 6 length: no change (=)

21) Gene 7 begins: increased (>)
22) Gene 7 ends: increased (>)
23) Gene 7 length: increased (>)

24) Gene 8 begins: increased (>)
25) Gene 8 ends: increased (>)
26) Gene 8 length: no change (=)

27) Gene 9 begins: increased (>)
28) Gene 9 ends: increased (>)
29) Gene 9 length: no change (=)

30) Gene 10 begins: increased (>)
31) Gene 10 ends: increased (>)
32) Gene 10 length: no change (=)

33) Gene 11 begins: increased (>)
34) Gene 11 ends: increased (>)
35) Gene 11 length: no change (=)



Pattern '230':
("<=<<=<<=<<=<<=<<=<<=<=>============")
Found in 1 SARS-CoV-2 virus.


Pattern '230' positions:

1) Nucleotide Length: decreased (<)
2) Gene Count: no change (=)

3) Gene 1 begins: decreased (<)
4) Gene 1 ends: decreased (<)
5) Gene 1 length: no change (=)

6) Gene 2 begins: decreased (<)
7) Gene 2 ends: decreased (<)
8) Gene 2 length: no change (=)

9) Gene 3 begins: decreased (<)
10) Gene 3 ends: decreased (<)
11) Gene 3 length: no change (=)

12) Gene 4 begins: decreased (<)
13) Gene 4 ends: decreased (<)
14) Gene 4 length: no change (=)

15) Gene 5 begins: decreased (<)
16) Gene 5 ends: decreased (<)
17) Gene 5 length: no change (=)

18) Gene 6 begins: decreased (<)
19) Gene 6 ends: decreased (<)
20) Gene 6 length: no change (=)

21) Gene 7 begins: decreased (<)
22) Gene 7 ends: no change (=)
23) Gene 7 length: increased (>)

24) Gene 8 begins: no change (=)
25) Gene 8 ends: no change (=)
26) Gene 8 length: no change (=)

27) Gene 9 begins: no change (=)
28) Gene 9 ends: no change (=)
29) Gene 9 length: no change (=)

30) Gene 10 begins: no change (=)
31) Gene 10 ends: no change (=)
32) Gene 10 length: no change (=)

33) Gene 11 begins: no change (=)
34) Gene 11 ends: no change (=)
35) Gene 11 length: no change (=)

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