Monday, October 16, 2023

GC Apdx 1

This is an appendix to: On The Origin Of A Genetic Constant - 2





GenBank Genome
Table: 1
(Arabian camel)
URL Link: HE863813.1

Genome info for HE863813.1:

HE863813 10436 bp DNA linear MAM 12-DEC-2012 Camelus dromedarius csn3 gene for kappa casein.

Nucleotide count: 10,436

Atom Atom Count Percent
Carbon 50,477 32.6501
Hydrogen 55,794 36.0893
Nitrogen 37,932 24.5356
Oxygen 10,397 6.7251
Totals 154,600 ~100.00




GenBank Genome
Table: 2
(Arabian camel)
URL Link: MW456837.1

Genome info for MW456837.1:

MW456837 10201 bp DNA linear MAM 21-APR-2021 Camelus dromedarius isolate 419 granzyme O GZMO gene
complete

Nucleotide count: 10,197
Non-Nucleotide Count: 4

Atom Atom Count Percent
Carbon 48,982 32.4412
Hydrogen 54,071 35.8117
Nitrogen 37,721 24.9829
Oxygen 10,213 6.7642
Totals 150,987 ~100.00




GenBank Genome
Table: 3
(Arabian camel)
URL Link: MW456838.1

Genome info for MW456838.1:

MW456838 10201 bp DNA linear MAM 21-APR-2021 Camelus dromedarius isolate 433 granzyme O GZMO gene
complete

Nucleotide count: 10,197
Non-Nucleotide Count: 4

Atom Atom Count Percent
Carbon 48,982 32.4414
Hydrogen 54,071 35.8119
Nitrogen 37,721 24.9831
Oxygen 10,212 6.7635
Totals 150,986 ~100.00




GenBank Genome
Table: 4
(Arabian camel)
URL Link: MW456839.1

Genome info for MW456839.1:

MW456839 10201 bp DNA linear MAM 21-APR-2021 Camelus dromedarius isolate 795 granzyme O GZMO gene
complete

Nucleotide count: 10,200
Non-Nucleotide Count: 1

Atom Atom Count Percent
Carbon 48,995 32.4406
Hydrogen 54,085 35.8108
Nitrogen 37,735 24.9851
Oxygen 10,215 6.7636
Totals 151,030 ~100.00




GenBank Genome
Table: 5
(Arabian camel)
URL Link: MW456840.1

Genome info for MW456840.1:

MW456840 10201 bp DNA linear MAM 21-APR-2021 Camelus dromedarius isolate 799 granzyme O GZMO gene
complete

Nucleotide count: 10,199
Non-Nucleotide Count: 2

Atom Atom Count Percent
Carbon 48,992 32.4412
Hydrogen 54,081 35.8110
Nitrogen 37,731 24.9844
Oxygen 10,214 6.7634
Totals 151,018 ~100.00




GenBank Genome
Table: 6
(Alpaca)
URL Link: MZ708721.1

Genome info for MZ708721.1:

MZ708721 16503 bp DNA circular MAM 06-SEP-2021 Vicugna pacos mitochondrion
complete genome.

Nucleotide count: 16,503

Atom Atom Count Percent
Carbon 78,189 32.4047
Hydrogen 87,047 36.0758
Nitrogen 60,267 24.9771
Oxygen 15,786 6.5424
Totals 241,289 ~100.00




GenBank Genome
Table: 7
(Alpaca)
URL Link: Y19184.1

Genome info for Y19184.1:

Y19184 16652 bp DNA circular MAM 26-JUL-2016 Lama pacos complete mitochondrial genome.

Nucleotide count: 16,652

Atom Atom Count Percent
Carbon 78,885 32.4020
Hydrogen 87,812 36.0688
Nitrogen 60,854 24.9958
Oxygen 15,906 6.5334
Totals 243,457 ~100.00




GenBank Genome
Table: 8
(Alpaca)
URL Link: AC241827.2

Genome info for AC241827.2:

AC241827 179140 bp DNA linear HTG 30-JUL-2010 Vicugna pacos clone CH246-499H21 WORKING DRAFT SEQUENCE 5 ordered

Nucleotide count: 178,740
Non-Nucleotide Count: 400

Atom Atom Count Percent
Carbon 865,414 32.5987
Hydrogen 954,626 35.9592
Nitrogen 654,350 24.6483
Oxygen 180,359 6.7938
Totals 2,654,749 ~100.00




GenBank Genome
Table: 9
(Alpaca)
URL Link: AC242466.1

Genome info for AC242466.1:

AC242466 180339 bp DNA linear HTG 14-SEP-2010 Vicugna pacos clone CH246-398M13 WORKING DRAFT SEQUENCE 10

Nucleotide count: 179,406
Non-Nucleotide Count: 933

Atom Atom Count Percent
Carbon 851,110 32.1612
Hydrogen 943,787 35.6632
Nitrogen 664,919 25.1255
Oxygen 186,575 7.0502
Totals 2,646,391 ~100.00




GenBank Genome
Table: 10
(Alpaca)
URL Link: AC242467.3

Genome info for AC242467.3:

AC242467 189860 bp DNA linear HTG 14-JAN-2011 Vicugna pacos clone CH246-447B1 WORKING DRAFT SEQUENCE 4 ordered

Nucleotide count: 189,560
Non-Nucleotide Count: 300

Atom Atom Count Percent
Carbon 891,610 31.9850
Hydrogen 986,192 35.3780
Nitrogen 720,244 25.8376
Oxygen 189,540 6.7994
Totals 2,787,586 ~100.00




GenBank Genome
Table: 11
(Gaur)
URL Link: MT345892.1

Genome info for MT345892.1:

MT345892 16345 bp DNA circular MAM 10-MAY-2020 Bos gaurus isolate GR01 mitochondrion
complete genome.

Nucleotide count: 16,345

Atom Atom Count Percent
Carbon 77,491 32.4379
Hydrogen 86,172 36.0718
Nitrogen 59,916 25.0810
Oxygen 15,311 6.4092
Totals 238,890 ~100.00




GenBank Genome
Table: 12
(Gaur)
URL Link: MT345893.1

Genome info for MT345893.1:

MT345893 16345 bp DNA circular MAM 10-MAY-2020 Bos gaurus isolate GR02 mitochondrion
complete genome.

Nucleotide count: 16,345

Atom Atom Count Percent
Carbon 77,489 32.4376
Hydrogen 86,171 36.0720
Nitrogen 59,915 25.0810
Oxygen 15,311 6.4093
Totals 238,886 ~100.00




GenBank Genome
Table: 13
(Gaur)
URL Link: MT360652.1

Genome info for MT360652.1:

MT360652 16345 bp DNA circular MAM 10-MAY-2020 Bos gaurus isolate GR03 mitochondrion
complete genome.

Nucleotide count: 16,345

Atom Atom Count Percent
Carbon 77,494 32.4380
Hydrogen 86,173 36.0709
Nitrogen 59,919 25.0813
Oxygen 15,313 6.4098
Totals 238,899 ~100.00




GenBank Genome
Table: 14
(Gaur)
URL Link: MT360653.1

Genome info for MT360653.1:

MT360653 16345 bp DNA circular MAM 10-MAY-2020 Bos gaurus isolate GR04 mitochondrion
complete genome.

Nucleotide count: 16,345

Atom Atom Count Percent
Carbon 77,492 32.4378
Hydrogen 86,172 36.0712
Nitrogen 59,918 25.0814
Oxygen 15,312 6.4095
Totals 238,894 ~100.00




GenBank Genome
Table: 15
(Gaur)
URL Link: MK770201.1

Genome info for MK770201.1:

MK770201 16367 bp DNA circular MAM 01-OCT-2019 Bos gaurus isolate S0029 mitochondrion
complete genome.

Nucleotide count: 16,367

Atom Atom Count Percent
Carbon 77,550 32.4306
Hydrogen 86,249 36.0684
Nitrogen 60,023 25.1010
Oxygen 15,304 6.4000
Totals 239,126 ~100.00




GenBank Genome
Table: 16
(Polar bear)
URL Link: GU573485.1

Genome info for GU573485.1:

GU573485 16809 bp DNA circular MAM 25-JUL-2016 Ursus maritimus isolate 2629 mitochondrion
complete genome.

Nucleotide count: 16,808
Non-Nucleotide Count: 1

Atom Atom Count Percent
Carbon 79,743 32.3960
Hydrogen 88,720 36.0429
Nitrogen 61,406 24.9465
Oxygen 16,282 6.6146
Totals 246,151 ~100.00




GenBank Genome
Table: 17
(Polar bear)
URL Link: GU573488.1

Genome info for GU573488.1:

GU573488 16898 bp DNA circular MAM 25-JUL-2016 Ursus maritimus mitochondrion
complete genome.

Nucleotide count: 16,898

Atom Atom Count Percent
Carbon 80,174 32.3958
Hydrogen 89,195 36.0409
Nitrogen 61,743 24.9484
Oxygen 16,371 6.6150
Totals 247,483 ~100.00




GenBank Genome
Table: 18
(Polar bear)
URL Link: GU573490.1

Genome info for GU573490.1:

GU573490 16808 bp DNA circular MAM 25-JUL-2016 Ursus maritimus isolate 495 mitochondrion
complete genome.

Nucleotide count: 16,808

Atom Atom Count Percent
Carbon 79,749 32.3972
Hydrogen 88,725 36.0436
Nitrogen 61,403 24.9443
Oxygen 16,283 6.6148
Totals 246,160 ~100.00




GenBank Genome
Table: 19
(Polar bear)
URL Link: OK001263.1

Genome info for OK001263.1:

OK001263 17020 bp DNA linear MAM 13-DEC-2021 Ursus maritimus voucher F-1863 mitochondrion
partial genome.

Nucleotide count: 17,020

Atom Atom Count Percent
Carbon 80,737 32.3911
Hydrogen 89,820 36.0351
Nitrogen 62,214 24.9598
Oxygen 16,486 6.6141
Totals 249,257 ~100.00




GenBank Genome
Table: 20
(Polar bear)
URL Link: OK001270.1

Genome info for OK001270.1:

OK001270 17020 bp DNA linear MAM 13-DEC-2021 Ursus maritimus voucher FR-275 mitochondrion
partial genome.

Nucleotide count: 17,011
Non-Nucleotide Count: 9

Atom Atom Count Percent
Carbon 80,699 32.3919
Hydrogen 89,777 36.0358
Nitrogen 62,177 24.9574
Oxygen 16,480 6.6149
Totals 249,133 ~100.00




Interim Totals For Tables 1-20:
(Total atom count: 11,764,972)

Atom Type Atom Type Count Low High Variation Average
Carbon 3,800,254 31.9850 32.6501 0.6651% 32.3014%
Hydrogen 4,208,740 35.3780 36.0893 0.7113% 35.7735%
Nitrogen 2,958,108 24.5356 25.8376 1.3020% 25.1433%
Oxygen 797,870 6.4000 7.0502 0.6502% 6.7817%



GenBank Genome
Table: 21
(Sun bear)
URL Link: OQ564458.1

Genome info for OQ564458.1:

OQ564458 16769 bp DNA linear MAM 09-APR-2023 Helarctos malayanus mitochondrion
partial genome.

Nucleotide count: 16,440
Non-Nucleotide Count: 329

Atom Atom Count Percent
Carbon 77,986 32.4036
Hydrogen 86,768 36.0525
Nitrogen 60,068 24.9586
Oxygen 15,849 6.5853
Totals 240,671 ~100.00




GenBank Genome
Table: 22
(Sun bear)
URL Link: OQ564459.1

Genome info for OQ564459.1:

OQ564459 16782 bp DNA circular MAM 09-APR-2023 Helarctos malayanus mitochondrion
complete genome.

Nucleotide count: 16,770
Non-Nucleotide Count: 12

Atom Atom Count Percent
Carbon 79,567 32.4021
Hydrogen 88,527 36.0509
Nitrogen 61,253 24.9441
Oxygen 16,214 6.6028
Totals 245,561 ~100.00




GenBank Genome
Table: 23
(Sun bear)
URL Link: OQ564460.1

Genome info for OQ564460.1:

OQ564460 16764 bp DNA linear MAM 09-APR-2023 Helarctos malayanus mitochondrion
partial genome.

Nucleotide count: 16,095
Non-Nucleotide Count: 669

Atom Atom Count Percent
Carbon 76,317 32.3972
Hydrogen 84,933 36.0547
Nitrogen 58,785 24.9547
Oxygen 15,532 6.5935
Totals 235,567 ~100.00




GenBank Genome
Table: 24
(Sun bear)
URL Link: OQ564461.1

Genome info for OQ564461.1:

OQ564461 16780 bp DNA linear MAM 09-APR-2023 Helarctos malayanus mitochondrion
partial genome.

Nucleotide count: 16,491
Non-Nucleotide Count: 289

Atom Atom Count Percent
Carbon 78,224 32.4036
Hydrogen 87,037 36.0543
Nitrogen 60,247 24.9568
Oxygen 15,897 6.5852
Totals 241,405 ~100.00




GenBank Genome
Table: 25
(Sun bear)
URL Link: OQ564462.1

Genome info for OQ564462.1:

OQ564462 16779 bp DNA linear MAM 09-APR-2023 Helarctos malayanus mitochondrion
partial genome.

Nucleotide count: 16,267
Non-Nucleotide Count: 512

Atom Atom Count Percent
Carbon 77,144 32.3993
Hydrogen 85,852 36.0565
Nitrogen 59,402 24.9479
Oxygen 15,706 6.5963
Totals 238,104 ~100.00




GenBank Genome
Table: 26
(Blackbuck)
URL Link: JN632598.1

Genome info for JN632598.1:

JN632598 16430 bp DNA circular MAM 19-JAN-2016 Antilope cervicapra isolate AWWP mitochondrion
complete genome.

Nucleotide count: 16,430

Atom Atom Count Percent
Carbon 77,889 32.4352
Hydrogen 86,582 36.0553
Nitrogen 60,332 25.1240
Oxygen 15,334 6.3855
Totals 240,137 ~100.00




GenBank Genome
Table: 27
(Blackbuck)
URL Link: AP003422.1

Genome info for AP003422.1:

AP003422 16431 bp DNA circular MAM 24-JUL-2016 Antilope cervicapra mitochondrial DNA complete genome.

Nucleotide count: 16,431

Atom Atom Count Percent
Carbon 77,900 32.4377
Hydrogen 86,593 36.0574
Nitrogen 60,331 25.1219
Oxygen 15,329 6.3830
Totals 240,153 ~100.00




GenBank Genome
Table: 28
(Black rat)
URL Link: CS694283.1

Genome info for CS694283.1:

CS694283 12525 bp DNA linear PAT 09-OCT-2007 Sequence 3 from Patent EP1820861.

Nucleotide count: 12,452
Non-Nucleotide Count: 73

Atom Atom Count Percent
Carbon 59,052 32.2044
Hydrogen 65,366 35.6478
Nitrogen 46,526 25.3733
Oxygen 12,422 6.7744
Totals 183,366 ~100.00




GenBank Genome
Table: 29
(Black rat)
URL Link: BD440326.1

Genome info for BD440326.1:

BD440326 12178 bp DNA linear PAT 04-NOV-2005 Novel actin-related sytoskeletal protein LACS.

Nucleotide count: 12,178

Atom Atom Count Percent
Carbon 58,452 32.3857
Hydrogen 63,569 35.2208
Nitrogen 47,977 26.5820
Oxygen 10,489 5.8115
Totals 180,487 ~100.00




GenBank Genome
Table: 30
(Black rat)
URL Link: BD442401.1

Genome info for BD442401.1:

BD442401 12525 bp DNA linear PAT 04-NOV-2005 C3B/C4B COMPLEMENT RECEPTOR-LIKE MOLECULES AND USES THEREOF.

Nucleotide count: 12,452
Non-Nucleotide Count: 73

Atom Atom Count Percent
Carbon 59,052 32.2044
Hydrogen 65,366 35.6478
Nitrogen 46,526 25.3733
Oxygen 12,422 6.7744
Totals 183,366 ~100.00




GenBank Genome
Table: 31
(Black rat)
URL Link: AX374893.1

Genome info for AX374893.1:

AX374893 12525 bp DNA linear PAT 01-MAR-2002 Sequence 3 from Patent WO0210199.

Nucleotide count: 12,452
Non-Nucleotide Count: 73

Atom Atom Count Percent
Carbon 59,052 32.2044
Hydrogen 65,366 35.6478
Nitrogen 46,526 25.3733
Oxygen 12,422 6.7744
Totals 183,366 ~100.00




GenBank Genome
Table: 32
(Black rat)
URL Link: HZ787264.1

Genome info for HZ787264.1:

HZ787264 30702 bp DNA linear PAT 29-JUN-2016 JP 2016505257-A/1: POLYNUCLEOTIDES ENCODING RODENT ANTIBODIES WITH

Nucleotide count: 30,652
Non-Nucleotide Count: 50

Atom Atom Count Percent
Carbon 145,439 32.1817
Hydrogen 160,541 35.5233
Nitrogen 115,775 25.6178
Oxygen 30,176 6.6771
Totals 451,931 ~100.00




GenBank Genome
Table: 33
(Buffalo)
URL Link: OM868832.1

Genome info for OM868832.1:

OM868832 16357 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Bubalus bubalis isolate CG1 mitochondrion sequence.

Nucleotide count: 16,357

Atom Atom Count Percent
Carbon 77,441 32.4104
Hydrogen 86,111 36.0389
Nitrogen 60,119 25.1608
Oxygen 15,268 6.3899
Totals 238,939 ~100.00




GenBank Genome
Table: 34
(Buffalo)
URL Link: OM868833.1

Genome info for OM868833.1:

OM868833 16357 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Bubalus bubalis isolate CG2 mitochondrion sequence.

Nucleotide count: 16,357

Atom Atom Count Percent
Carbon 77,440 32.4104
Hydrogen 86,110 36.0389
Nitrogen 60,120 25.1615
Oxygen 15,266 6.3892
Totals 238,936 ~100.00




GenBank Genome
Table: 35
(Buffalo)
URL Link: OM868834.1

Genome info for OM868834.1:

OM868834 16357 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Bubalus bubalis isolate CG3 mitochondrion sequence.

Nucleotide count: 16,357

Atom Atom Count Percent
Carbon 77,440 32.4104
Hydrogen 86,110 36.0389
Nitrogen 60,120 25.1615
Oxygen 15,266 6.3892
Totals 238,936 ~100.00




GenBank Genome
Table: 36
(Buffalo)
URL Link: OM868835.1

Genome info for OM868835.1:

OM868835 16357 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Bubalus bubalis isolate CG4 mitochondrion sequence.

Nucleotide count: 16,357

Atom Atom Count Percent
Carbon 77,441 32.4105
Hydrogen 86,111 36.0391
Nitrogen 60,119 25.1609
Oxygen 15,267 6.3895
Totals 238,938 ~100.00




GenBank Genome
Table: 37
(Buffalo)
URL Link: OM868836.1

Genome info for OM868836.1:

OM868836 16357 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Bubalus bubalis isolate CG5 mitochondrion sequence.

Nucleotide count: 16,357

Atom Atom Count Percent
Carbon 77,441 32.4105
Hydrogen 86,111 36.0391
Nitrogen 60,119 25.1609
Oxygen 15,267 6.3895
Totals 238,938 ~100.00




GenBank Genome
Table: 38
(Cat)
URL Link: OR077766.1

Genome info for OR077766.1:

OR077766 16437 bp DNA circular MAM 05-JUL-2023 Felis catus isolate Cat 104 mitochondrion
complete genome.

Nucleotide count: 16,437

Atom Atom Count Percent
Carbon 77,859 32.4134
Hydrogen 86,640 36.0690
Nitrogen 60,168 25.0485
Oxygen 15,539 6.4690
Totals 240,206 ~100.00




GenBank Genome
Table: 39
(Cat)
URL Link: OR077767.1

Genome info for OR077767.1:

OR077767 16438 bp DNA circular MAM 05-JUL-2023 Felis catus isolate Cat 105 mitochondrion
complete genome.

Nucleotide count: 16,438

Atom Atom Count Percent
Carbon 77,867 32.4143
Hydrogen 86,647 36.0693
Nitrogen 60,173 25.0487
Oxygen 15,537 6.4677
Totals 240,224 ~100.00




GenBank Genome
Table: 40
(Cat)
URL Link: OR077768.1

Genome info for OR077768.1:

OR077768 16437 bp DNA circular MAM 05-JUL-2023 Felis catus isolate Cat 106 mitochondrion
complete genome.

Nucleotide count: 16,437

Atom Atom Count Percent
Carbon 77,865 32.4151
Hydrogen 86,643 36.0694
Nitrogen 60,171 25.0491
Oxygen 15,533 6.4664
Totals 240,212 ~100.00




Interim Totals For Tables 21-40:
(Total atom count: 4,779,443)

Atom Type Atom Type Count Low High Variation Average
Carbon 1,546,868 32.1817 32.4377 0.2560% 32.3650%
Hydrogen 1,716,983 35.2208 36.0694 0.8486% 35.9243%
Nitrogen 1,204,857 24.9441 26.5820 1.6379% 25.2092%
Oxygen 310,735 5.8115 6.7744 0.9629% 6.5015%

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