Monday, October 16, 2023

GC Apdx 7

This is an appendix to: On The Origin Of A Genetic Constant - 2




GenBank Genome
Table: 221
(Mango)
URL Link: MK936544.1

Genome info for MK936544.1:

MK936544 13264 bp DNA linear PLN 16-JUL-2019 Mangifera indica polygalacturonase PG22-8 gene complete cds.

Nucleotide count: 13,264

Atom Atom Count Percent
Carbon 64,000 32.5638
Hydrogen 70,543 35.8930
Nitrogen 49,011 24.9373
Oxygen 12,983 6.6059
Totals 196,537 ~100.00




GenBank Genome
Table: 222
(Onion)
URL Link: AY585677.3

Genome info for AY585677.3:

AY585677 11022 bp DNA linear PLN 02-SEP-2014 Allium cepa transposon PINK complete sequence; and anthocyanidin

Nucleotide count: 11,022

Atom Atom Count Percent
Carbon 53,183 32.6280
Hydrogen 58,723 36.0268
Nitrogen 40,417 24.7960
Oxygen 10,675 6.5492
Totals 162,998 ~100.00




GenBank Genome
Table: 223
(Onion)
URL Link: KU318712.1

Genome info for KU318712.1:

KU318712 316363 bp DNA circular PLN 02-MAY-2016 Allium cepa mitochondrion complete genome.

Nucleotide count: 316,363

Atom Atom Count Percent
Carbon 1,510,312 32.3103
Hydrogen 1,667,772 35.6789
Nitrogen 1,180,938 25.2640
Oxygen 315,376 6.7469
Totals 4,674,398 ~100.00




GenBank Genome
Table: 224
(Onion)
URL Link: KM088013.1

Genome info for KM088013.1:

KM088013 153529 bp DNA circular PLN 03-AUG-2015 Allium cepa chloroplast complete genome.

Nucleotide count: 153,529

Atom Atom Count Percent
Carbon 738,886 32.5047
Hydrogen 816,620 35.9243
Nitrogen 563,202 24.7761
Oxygen 154,458 6.7948
Totals 2,273,166 ~100.00




GenBank Genome
Table: 225
(Onion)
URL Link: KM088014.1

Genome info for KM088014.1:

KM088014 153440 bp DNA circular PLN 03-AUG-2015 Allium cepa strain CMS-S chloroplast complete genome.

Nucleotide count: 153,440

Atom Atom Count Percent
Carbon 738,455 32.5044
Hydrogen 816,135 35.9236
Nitrogen 562,905 24.7772
Oxygen 154,369 6.7948
Totals 2,271,864 ~100.00




GenBank Genome
Table: 226
(Onion)
URL Link: KM088015.1

Genome info for KM088015.1:

KM088015 153568 bp DNA circular PLN 03-AUG-2015 Allium cepa strain CMS-T chloroplast complete genome.

Nucleotide count: 153,568

Atom Atom Count Percent
Carbon 739,075 32.5048
Hydrogen 816,836 35.9248
Nitrogen 563,322 24.7751
Oxygen 154,505 6.7952
Totals 2,273,738 ~100.00




GenBank Genome
Table: 227
(Orange)
URL Link: DQ864733.1

Genome info for DQ864733.1:

DQ864733 160129 bp DNA linear PLN 14-JUL-2016 Citrus sinensis chloroplast complete genome.

Nucleotide count: 160,129

Atom Atom Count Percent
Carbon 769,240 32.4664
Hydrogen 850,373 35.8907
Nitrogen 588,651 24.8445
Oxygen 161,077 6.7984
Totals 2,369,341 ~100.00




GenBank Genome
Table: 228
(Orange)
URL Link: ON641345.1

Genome info for ON641345.1:

ON641345 160121 bp DNA circular PLN 27-AUG-2022 Citrus sinensis isolate BPTPS119 voucher LISE:96440 chloroplast

Nucleotide count: 160,121

Atom Atom Count Percent
Carbon 769,203 32.4665
Hydrogen 850,336 35.8910
Nitrogen 588,608 24.8439
Oxygen 161,074 6.7986
Totals 2,369,221 ~100.00




GenBank Genome
Table: 229
(Orange)
URL Link: ON685189.1

Genome info for ON685189.1:

ON685189 42160 bp DNA linear PLN 25-JUL-2022 UNVERIFIED: Citrus sinensis sequence.

Nucleotide count: 42,160

Atom Atom Count Percent
Carbon 203,203 32.5386
Hydrogen 223,871 35.8481
Nitrogen 156,393 25.0430
Oxygen 41,032 6.5704
Totals 624,499 ~100.00




GenBank Genome
Table: 230
(Orange)
URL Link: ON911462.1

Genome info for ON911462.1:

ON911462 160121 bp DNA circular PLN 06-MAY-2023 Citrus sinensis voucher WTFRC10032732 plastid complete genome.

Nucleotide count: 160,121

Atom Atom Count Percent
Carbon 769,203 32.4665
Hydrogen 850,335 35.8909
Nitrogen 588,611 24.8441
Oxygen 161,073 6.7986
Totals 2,369,222 ~100.00




GenBank Genome
Table: 231
(Orange)
URL Link: MH885870.1

Genome info for MH885870.1:

MH885870 12511 bp DNA linear PLN 27-FEB-2019 Citrus sinensis voucher CRC950 basic helix-loop-helix transcription

Nucleotide count: 12,511

Atom Atom Count Percent
Carbon 60,371 32.4912
Hydrogen 66,493 35.7861
Nitrogen 46,373 24.9576
Oxygen 12,570 6.7651
Totals 185,807 ~100.00




GenBank Genome
Table: 232
(Pineapple)
URL Link: LR828281.1

Genome info for LR828281.1:

LR828281 10526445 bp DNA linear PLN 15-JUL-2020 Ananas comosus genome assembly
chromosome: 1.

Nucleotide count: 10,385,241
Non-Nucleotide Count: 141,204

Atom Atom Count Percent
Carbon 49,928,087 32.4661
Hydrogen 55,125,190 35.8455
Nitrogen 38,333,014 24.9263
Oxygen 10,399,196 6.7621
Totals 153,785,487 ~100.00




GenBank Genome
Table: 233
(Pineapple)
URL Link: LR828282.1

Genome info for LR828282.1:

LR828282 17334668 bp DNA linear PLN 15-JUL-2020 Ananas comosus genome assembly
chromosome: 2.

Nucleotide count: 17,052,651
Non-Nucleotide Count: 282,017

Atom Atom Count Percent
Carbon 82,048,486 32.4853
Hydrogen 90,592,881 35.8683
Nitrogen 62,844,839 24.8821
Oxygen 17,084,641 6.7643
Totals 252,570,847 ~100.00




GenBank Genome
Table: 234
(Pineapple)
URL Link: LR828283.1

Genome info for LR828283.1:

LR828283 16781886 bp DNA linear PLN 15-JUL-2020 Ananas comosus genome assembly
chromosome: 3.

Nucleotide count: 16,540,692
Non-Nucleotide Count: 241,194

Atom Atom Count Percent
Carbon 79,599,168 32.4877
Hydrogen 87,868,337 35.8627
Nitrogen 61,000,245 24.8967
Oxygen 16,545,310 6.7528
Totals 245,013,060 ~100.00




GenBank Genome
Table: 235
(Pineapple)
URL Link: LR828284.1

Genome info for LR828284.1:

LR828284 15584765 bp DNA linear PLN 15-JUL-2020 Ananas comosus genome assembly
chromosome: 4.

Nucleotide count: 15,347,886
Non-Nucleotide Count: 236,879

Atom Atom Count Percent
Carbon 73,857,527 32.4888
Hydrogen 81,537,220 35.8669
Nitrogen 56,582,254 24.8896
Oxygen 15,355,495 6.7546
Totals 227,332,496 ~100.00




GenBank Genome
Table: 236
(Pineapple)
URL Link: LR828285.1

Genome info for LR828285.1:

LR828285 15024279 bp DNA linear PLN 15-JUL-2020 Ananas comosus genome assembly
chromosome: 5.

Nucleotide count: 14,816,345
Non-Nucleotide Count: 207,934

Atom Atom Count Percent
Carbon 71,311,254 32.4912
Hydrogen 78,724,770 35.8690
Nitrogen 54,611,648 24.8825
Oxygen 14,830,857 6.7573
Totals 219,478,529 ~100.00




GenBank Genome
Table: 237
(Potato)
URL Link: A85204.1

Genome info for A85204.1:

A85204 10811 bp DNA linear PAT 21-JAN-2000 Sequence 1 from Patent WO9841643.

Nucleotide count: 10,811

Atom Atom Count Percent
Carbon 52,435 32.6606
Hydrogen 57,840 36.0273
Nitrogen 39,460 24.5788
Oxygen 10,810 6.7333
Totals 160,545 ~100.00




GenBank Genome
Table: 238
(Potato)
URL Link: AX709863.1

Genome info for AX709863.1:

AX709863 10388 bp DNA linear PAT 10-APR-2003 Sequence 1 from Patent EP1288301.

Nucleotide count: 10,388

Atom Atom Count Percent
Carbon 50,173 32.5087
Hydrogen 55,429 35.9143
Nitrogen 37,939 24.5819
Oxygen 10,796 6.9951
Totals 154,337 ~100.00




GenBank Genome
Table: 239
(Potato)
URL Link: AX716983.1

Genome info for AX716983.1:

AX716983 10388 bp DNA linear PAT 15-APR-2003 Sequence 1 from Patent WO03020013.

Nucleotide count: 10,388

Atom Atom Count Percent
Carbon 50,173 32.5087
Hydrogen 55,429 35.9143
Nitrogen 37,939 24.5819
Oxygen 10,796 6.9951
Totals 154,337 ~100.00




GenBank Genome
Table: 240
(Potato)
URL Link: JA063118.1

Genome info for JA063118.1:

JA063118 11000 bp DNA linear PAT 06-APR-2011 Sequence 13 from Patent WO2011028120.

Nucleotide count: 11,000

Atom Atom Count Percent
Carbon 52,646 32.4437
Hydrogen 58,434 36.0106
Nitrogen 39,990 24.6443
Oxygen 11,199 6.9015
Totals 162,269 ~100.00




Interim Totals For Tables 221-240:
(Total atom count: 1,118,582,698)

Atom Type Atom Type Count Low High Variation Average
Carbon 363,365,080 32.3103 32.6606 0.3503% 32.4844%
Hydrogen 401,163,567 35.6789 36.0273 0.3484% 35.8636%
Nitrogen 278,455,759 24.5788 25.2640 0.6852% 24.8936%
Oxygen 75,598,292 6.5492 6.9951 0.4459% 6.7584%



GenBank Genome
Table: 241
(Potato)
URL Link: JA361408.1

Genome info for JA361408.1:

JA361408 11149 bp DNA linear PAT 16-MAY-2011 Sequence 1 from Patent EP2319872.

Nucleotide count: 11,149

Atom Atom Count Percent
Carbon 52,978 32.2006
Hydrogen 58,409 35.5016
Nitrogen 42,219 25.6611
Oxygen 10,919 6.6367
Totals 164,525 ~100.00




GenBank Genome
Table: 242
(Radish)
URL Link: CQ815007.1

Genome info for CQ815007.1:

CQ815007 22770 bp DNA linear PAT 24-MAY-2004 Sequence 7 from Patent WO2004039988.

Nucleotide count: 22,770

Atom Atom Count Percent
Carbon 110,231 32.5513
Hydrogen 121,756 35.9546
Nitrogen 82,894 24.4786
Oxygen 23,757 7.0155
Totals 338,638 ~100.00




GenBank Genome
Table: 243
(Radish)
URL Link: PA560131.1

Genome info for PA560131.1:

PA560131 10555 bp DNA linear PAT 27-JAN-2023 WO 2022210099-A/1: Intergeneric cruciferous plants high in

Nucleotide count: 10,555

Atom Atom Count Percent
Carbon 50,291 32.3710
Hydrogen 55,969 36.0258
Nitrogen 38,225 24.6045
Oxygen 10,873 6.9987
Totals 155,358 ~100.00




GenBank Genome
Table: 244
(Radish)
URL Link: LR778310.1

Genome info for LR778310.1:

LR778310 58898396 bp DNA linear PLN 11-MAR-2020 Raphanus sativus genome assembly chromosome: 1.

Nucleotide count: 58,891,596
Non-Nucleotide Count: 6,800

Atom Atom Count Percent
Carbon 284,033,564 32.5370
Hydrogen 313,452,356 35.9070
Nitrogen 216,626,020 24.8152
Oxygen 58,843,317 6.7407
Totals 872,955,257 ~100.00




GenBank Genome
Table: 245
(Radish)
URL Link: LR778311.1

Genome info for LR778311.1:

LR778311 53721154 bp DNA linear PLN 11-MAR-2020 Raphanus sativus genome assembly chromosome: 2.

Nucleotide count: 53,716,254
Non-Nucleotide Count: 4,900

Atom Atom Count Percent
Carbon 259,042,535 32.5338
Hydrogen 285,900,936 35.9071
Nitrogen 197,544,802 24.8102
Oxygen 53,736,756 6.7489
Totals 796,225,029 ~100.00




GenBank Genome
Table: 246
(Radish)
URL Link: LR778312.1

Genome info for LR778312.1:

LR778312 45313491 bp DNA linear PLN 11-MAR-2020 Raphanus sativus genome assembly chromosome: 3.

Nucleotide count: 45,304,691
Non-Nucleotide Count: 8,800

Atom Atom Count Percent
Carbon 218,326,893 32.5203
Hydrogen 240,960,417 35.8916
Nitrogen 166,819,445 24.8481
Oxygen 45,249,318 6.7400
Totals 671,356,073 ~100.00




GenBank Genome
Table: 247
(Sandalwood)
URL Link: MW464915.1

Genome info for MW464915.1:

MW464915 144034 bp DNA circular PLN 09-APR-2023 Santalum album chloroplast complete genome.

Nucleotide count: 144,034

Atom Atom Count Percent
Carbon 692,284 32.4774
Hydrogen 765,589 35.9164
Nitrogen 528,141 24.7769
Oxygen 145,570 6.8292
Totals 2,131,584 ~100.00




GenBank Genome
Table: 248
(Sandalwood)
URL Link: MW464922.1

Genome info for MW464922.1:

MW464922 144101 bp DNA circular PLN 09-APR-2023 Santalum album chloroplast complete genome.

Nucleotide count: 144,101

Atom Atom Count Percent
Carbon 692,606 32.4776
Hydrogen 765,946 35.9166
Nitrogen 528,384 24.7769
Oxygen 145,631 6.8289
Totals 2,132,567 ~100.00




GenBank Genome
Table: 249
(Sandalwood)
URL Link: MN106256.1

Genome info for MN106256.1:

MN106256 144101 bp DNA circular PLN 31-MAY-2020 Santalum album chloroplast complete genome.

Nucleotide count: 144,101

Atom Atom Count Percent
Carbon 692,606 32.4776
Hydrogen 765,946 35.9166
Nitrogen 528,384 24.7769
Oxygen 145,631 6.8289
Totals 2,132,567 ~100.00




GenBank Genome
Table: 250
(Sandalwood)
URL Link: MN414167.1

Genome info for MN414167.1:

MN414167 144030 bp DNA linear PLN 07-JUN-2021 UNVERIFIED: Santalum album chloroplast sequence sequence.

Nucleotide count: 144,030

Atom Atom Count Percent
Carbon 692,266 32.4774
Hydrogen 765,568 35.9164
Nitrogen 528,128 24.7770
Oxygen 145,567 6.8292
Totals 2,131,529 ~100.00




GenBank Genome
Table: 251
(Sandalwood)
URL Link: OQ868374.1

Genome info for OQ868374.1:

OQ868374 351043 bp DNA circular PLN 27-MAY-2023 Santalum album mitochondrion complete genome.

Nucleotide count: 351,043

Atom Atom Count Percent
Carbon 1,675,641 32.3006
Hydrogen 1,850,803 35.6772
Nitrogen 1,309,303 25.2389
Oxygen 351,894 6.7833
Totals 5,187,641 ~100.00




GenBank Genome
Table: 252
(Spinach)
URL Link: MP149093.1

Genome info for MP149093.1:

MP149093 10415 bp DNA linear PAT 15-MAY-2019 Sequence 18 from Patent WO2019063839.

Nucleotide count: 10,415

Atom Atom Count Percent
Carbon 50,330 32.5293
Hydrogen 55,574 35.9186
Nitrogen 38,088 24.6171
Oxygen 10,730 6.9350
Totals 154,722 ~100.00




GenBank Genome
Table: 253
(Spinach)
URL Link: MP149096.1

Genome info for MP149096.1:

MP149096 17524 bp DNA linear PAT 15-MAY-2019 Sequence 21 from Patent WO2019063839.

Nucleotide count: 17,482
Non-Nucleotide Count: 42

Atom Atom Count Percent
Carbon 84,502 32.5272
Hydrogen 93,255 35.8964
Nitrogen 64,059 24.6581
Oxygen 17,973 6.9183
Totals 259,789 ~100.00




GenBank Genome
Table: 254
(Spinach)
URL Link: AF035536.1

Genome info for AF035536.1:

AF035536 10328 bp DNA linear PLN 28-APR-1998 Spinacia oleracea cold acclimation protein CAP160 gene complete

Nucleotide count: 10,322
Non-Nucleotide Count: 6

Atom Atom Count Percent
Carbon 49,702 32.4597
Hydrogen 54,827 35.8068
Nitrogen 38,143 24.9107
Oxygen 10,447 6.8228
Totals 153,119 ~100.00




GenBank Genome
Table: 255
(Spinach)
URL Link: KY768855.1

Genome info for KY768855.1:

KY768855 329613 bp DNA circular PLN 12-AUG-2017 Spinacia oleracea mitochondrion complete genome.

Nucleotide count: 329,613

Atom Atom Count Percent
Carbon 1,576,222 32.3543
Hydrogen 1,741,611 35.7492
Nitrogen 1,223,741 25.1191
Oxygen 330,178 6.7774
Totals 4,871,752 ~100.00




GenBank Genome
Table: 256
(Spinach)
URL Link: AJ400848.1

Genome info for AJ400848.1:

AJ400848 150725 bp DNA circular PLN 26-JUL-2016 Spinacia oleracea complete chloroplast genome.

Nucleotide count: 150,725

Atom Atom Count Percent
Carbon 725,348 32.5044
Hydrogen 801,725 35.9271
Nitrogen 552,771 24.7709
Oxygen 151,691 6.7976
Totals 2,231,535 ~100.00




GenBank Genome
Table: 257
(Tomato)
URL Link: DQ347959.1

Genome info for DQ347959.1:

DQ347959 155461 bp DNA circular PLN 13-JAN-2014 Solanum lycopersicum cultivar LA3023 chloroplast complete genome.

Nucleotide count: 155,461

Atom Atom Count Percent
Carbon 747,381 32.4807
Hydrogen 826,266 35.9089
Nitrogen 570,574 24.7968
Oxygen 156,782 6.8136
Totals 2,301,003 ~100.00




GenBank Genome
Table: 258
(Turmeric)
URL Link: MK919702.1

Genome info for MK919702.1:

MK919702 159550 bp DNA circular PLN 05-JUL-2019 Curcuma longa voucher wen13706 chloroplast complete genome.

Nucleotide count: 159,477
Non-Nucleotide Count: 73

Atom Atom Count Percent
Carbon 767,897 32.5157
Hydrogen 848,810 35.9419
Nitrogen 584,134 24.7345
Oxygen 160,777 6.8079
Totals 2,361,618 ~100.00




GenBank Genome
Table: 259
(Turmeric)
URL Link: MK965541.1

Genome info for MK965541.1:

MK965541 162255 bp DNA circular PLN 20-JAN-2020 Curcuma longa chloroplast complete genome.

Nucleotide count: 162,255

Atom Atom Count Percent
Carbon 781,401 32.5187
Hydrogen 863,476 35.9344
Nitrogen 594,924 24.7583
Oxygen 163,125 6.7886
Totals 2,402,926 ~100.00




GenBank Genome
Table: 260
(Turmeric)
URL Link: MN711722.1

Genome info for MN711722.1:

MN711722 162232 bp DNA circular PLN 04-APR-2020 Curcuma longa chloroplast complete genome.

Nucleotide count: 162,232

Atom Atom Count Percent
Carbon 781,283 32.5186
Hydrogen 863,384 35.9359
Nitrogen 594,734 24.7541
Oxygen 163,169 6.7914
Totals 2,402,570 ~100.00




Interim Totals For Tables 241-260:
(Total atom count: 2,372,049,802)

Atom Type Atom Type Count Low High Variation Average
Carbon 771,625,961 32.2006 32.5513 0.3507% 32.5299%
Hydrogen 851,612,623 35.5016 36.0258 0.5242% 35.9020%
Nitrogen 588,837,113 24.4786 25.6611 1.1825% 24.8240%
Oxygen 159,974,105 6.6367 7.0155 0.3788% 6.7441%

No comments:

Post a Comment