Wednesday, July 9, 2025

OTOOAGC APNDXE

This is an appendix to: On The Origin Of A Genetic Constant - 15


Ancient Egyptian mummy DNA.

Here is a description of the table items:

Link: link to GenBank data URL
Organism: microbiology nomenclature of current genome
Nucleotide count: nucleotides (A,C,G,T,U) in GenBank sequence

'A' count: Adenine
'C' count: Cytocine
'G' count: Guanine
'T' count: Thymine
'U' count: Uracil
'N' count: unknown nucleotide type
Plus 'N' uncert.: 'N' count relative percent

Atom Type (atoms that make up DNA/RNA nucleotides)
Atom Count quantity of atom type in the subject genome
Atom Percent % of the atom type in the subject genome
DNA/RNA const (DNA or RNA constant of the nucleoties)
Variation From Const (atom % variation from the constant)
Atom Count Variation number of atoms varying from const
Error Percent variation percent (of this atom type only)
Plus 'N' uncert. error % after 'N' uncertainty is considered
(note: error % total is not sum of "Error Percent")

The focus of the operation to analyze those parts is to note how many atoms of each type should be in the sequence compared to how many there actually are.

Even though this will determine if it is scientifically accurate or not, the judgment as to the adequacy of the sequence for any particular purpose, is determined bythe purpose for which this sequence at this time is being used.



Link: ENA

Fastaq File: ERR14836690
Version: M_A01366_1880833320
Organism: homo sapiens DNA Egyptian mummy

Nucleotide Count: 1,880,833,380

'A' count: 550,957,368
'C' count: 367,635,663
'G' count: 341,180,777
'T' count: 618,472,555
'N' count: 2,587,015
'N' uncertainty: 0.00138

Atom
Type
Atom
Count
Atom
Percent
DNA
Const
Variation
From Const
Atom Count
Variation
Error
Percent
Plus 'N'
uncert.
carbon 433,661,560 21.5773370 32.2033898 10.6260528 313,143,352 1 062.61
hydrogen 1,419,769,778 70.6423021 35.5932203 35.0490818 2,516,986,773 3 504.91
nitrogen 2,505,575,528 124.6678342 25.4237288 99.2441054 3,850,465,912 9 924.41
oxygen 1,945,761,550 96.8136365 6.7796610 90.0339755 3,385,955,814 9 003.40
Totals 2,009,801,120 100 100 234.9532155 1,476,617,259 73.47% 73.57%


Link: ENA

Fastaq File: ERR14836688
Version: M_K00102_2026800
Organism: homo sapiens DNA Egyptian mummy

Nucleotide Count: 2,026,862

'A' count: 596,788
'C' count: 397,701
'G' count: 359,932
'T' count: 671,625
'N' count: 814
'N' uncertainty: 0.00040

Atom
Type
Atom
Count
Atom
Percent
DNA
Const
Variation
From Const
Atom Count
Variation
Error
Percent
Plus 'N'
uncert.
carbon 9,732,529 32.4902605 32.2033898 0.2868707 2,791,977 28.69 28.70%
hydrogen 10,801,855 36.0600089 35.5932203 0.4667886 5,042,182 46.68 46.70%
nitrogen 7,319,953 24.4363186 25.4237288 0.9874102 7,227,796 98.74 98.78%
oxygen 2,100,883 7.0134120 6.7796610 0.2337510 491,083 23.38 23.38%
Totals 29,955,220 100 100 1.9748205 15,553,038 51.92% 51.94%


Link: ENA

Fastaq File: ERR14836684
Version: M_A01366_388642680
Organism: homo sapiens DNA Egyptian mummy

Nucleotide Count: 388,642,739

'A' count: 111,673,700
'C' count: 76,945,579
'G' count: 70,202,302
'T' count: 129,585,603
'N' count: 235,553
'N' uncertainty: 0.00061

Atom
Type
Atom
Count
Atom
Percent
DNA
Const
Variation
From Const
Atom Count
Variation
Error
Percent
Plus 'N'
uncert.
carbon 1,865,090,341 128.8533814 32.2033898 96.6499916 4,167,306,650 9 665.00
hydrogen 2,071,621,523 143.1219884 35.5932203 107.5287681 3,715,578,313 10 752.88
nitrogen 1,399,387,953 96.6794292 25.4237288 71.2557004 930,120,956 7 125.57
oxygen 406,319,087 28.0713417 6.7796610 21.2916807 61,281,675 2 129.17
Totals 1,447,451,608 100 100 296.7261409 284,353,002 19.65% 19.66%


Link: ENA

Fastaq File: ERR14836686
Version: M_K00102_6018300
Organism: homo sapiens DNA Egyptian mummy

Nucleotide Count: 6,018,310

'A' count: 1,759,636
'C' count: 1,172,773
'G' count: 1,089,589
'T' count: 1,995,068
'N' count: 1,242
'N' uncertainty: 0.00021

Atom
Type
Atom
Count
Atom
Percent
DNA
Const
Variation
From Const
Atom Count
Variation
Error
Percent
Plus 'N'
uncert.
carbon 28,912,557 32.4860071 32.2033898 0.2826173 8,171,187 28.26 28.27%
hydrogen 32,080,398 36.0453776 35.5932203 0.4521573 14,505,387 45.22 45.23%
nitrogen 21,754,580 24.4433393 25.4237288 0.9803895 21,327,962 98.04 98.06%
oxygen 6,252,498 7.0252760 6.7796610 0.2456150 1,535,707 24.56 24.57%
Totals 89,000,033 100 100 1.9607792 45,540,243 51.17% 51.18%


Link: ENA

Fastaq File: ERR14836687
Version: M_K00102_15670140
Organism: homo sapiens DNA Egyptian mummy

Nucleotide Count: 15,670,160

'A' count: 4,541,997
'C' count: 3,086,527
'G' count: 2,872,862
'T' count: 5,165,430
'N' count: 3,342
'N' uncertainty: 0.00021

Atom
Type
Atom
Count
Atom
Percent
DNA
Const
Variation
From Const
Atom Count
Variation
Error
Percent
Plus 'N'
uncert.
carbon 75,247,553 32.4759982 32.2033898 0.2726084 20,513,117 27.26 27.27%
hydrogen 83,499,510 36.0374501 35.5932203 0.4442298 37,092,973 44.42 44.43%
nitrogen 56,664,736 24.4558632 25.4237288 0.9678656 54,843,846 96.79 96.81%
oxygen 16,290,249 7.0306884 6.7796610 0.2510274 4,089,298 25.10 25.11%
Totals 231,702,048 100 100 1.9357312 116,539,234 50.30% 50.31%


Link: ENA

Fastaq File: ERR14836689
Version: M_K00102_1486020
Organism: homo sapiens DNA Egyptian mummy

Nucleotide Count: 1,486,037

'A' count: 435,455
'C' count: 295,087
'G' count: 269,373
'T' count: 484,593
'N' count: 1,527
'N' uncertainty: 0.00103

Atom
Type
Atom
Count
Atom
Percent
DNA
Const
Variation
From Const
Atom Count
Variation
Error
Percent
Plus 'N'
uncert.
carbon 7,127,453 32.4760185 32.2033898 0.2726287 1,943,148 27.26 27.29%
hydrogen 7,907,133 36.0286062 35.5932203 0.4353859 3,442,654 43.54 43.58%
nitrogen 5,378,587 24.5073648 25.4237288 0.9163640 4,928,743 91.64 91.73%
oxygen 1,533,646 6.9880104 6.7796610 0.2083494 319,534 20.83 20.86%
Totals 21,946,819 100 100 1.8327280 10,634,079 48.45% 48.50%


Link: ENA

Fastaq File: ERR14836685
Version: M_K00102_1776660
Organism: homo sapiens DNA Egyptian mummy

Nucleotide Count: 1,776,716

'A' count: 510,538
'C' count: 355,558
'G' count: 326,197
'T' count: 584,090
'N' count: 331
'N' uncertainty: 0.00019

Atom
Type
Atom
Count
Atom
Percent
DNA
Const
Variation
From Const
Atom Count
Variation
Error
Percent
Plus 'N'
uncert.
carbon 8,526,357 32.4679696 32.2033898 0.2645798 2,255,901 26.46 26.46%
hydrogen 9,466,005 36.0461053 35.5932203 0.4528850 4,287,011 45.29 45.30%
nitrogen 6,418,529 24.4414589 25.4237288 0.9822699 6,304,727 98.23 98.25%
oxygen 1,849,935 7.0444662 6.7796610 0.2648052 489,872 26.48 26.49%
Totals 26,260,826 100 100 1.9645399 13,337,511 50.79% 50.80%

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