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| What up? |
I. Preface
In the post "On The Origin of Genieology" a lot of the problems discussed were recognized as resulting from holding on to pseudoscience of the past.
A lot of that is due to loose nomenclature practices as well as the gigantic size of the genetic data available (which makes studying genetic hypotheses a daunting task).
For example, in this current series human DNA is formidable in terms of gigabytes of data, but is dwarfed by the size of the eDNA data from the Greenland eDna research (A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA).
To start with, I searched current human DNA for current animal DNA of animals the paper estimates were contained in that ancient Greenlan ecosystem eDNA (see Section III below).
II. FNA Files
Here is a "wget" example I made and am using in the Greenland search for "human eDNA", i.e., the "wget" command telling "wget" to download files:
wget -N -nH -nd -r -e robots=off --no-parent --input-file=wgetDNAfiles.txt
the contents of that "wgetDNAfiles.txt" file:
https://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/011/764/305/GCF_011764305.1_ASM1176430v1.1/GCF_011764305.1_ASM1176430v1.1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/017/311/325/GCF_017311325.1_ASM1731132v1/GCF_017311325.1_ASM1731132v1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/754/665/GCF_000754665.1_Bison_UMD1.0/GCF_000754665.1_Bison_UMD1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/002/863/925/GCF_002863925.1_EquCab3.0/GCF_002863925.1_EquCab3.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/003/160/815/GCF_003160815.1_VulVul2.2/GCF_003160815.1_VulVul2.2_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/020/975/775/GCF_020975775.1_gsc_jax_bbear_1.0/GCF_020975775.1_gsc_jax_bbear_1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/018/345/385/GCF_018345385.1_ASM1834538v1/GCF_018345385.1_ASM1834538v1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/015/227/675/GCF_015227675.2_mRatBN7.2/GCF_015227675.2_mRatBN7.2_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/002/285/GCF_000002285.3_CanFam3.1/GCF_000002285.3_CanFam3.1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/003/025/GCF_000003025.6_Sscrofa11.1/GCF_000003025.6_Sscrofa11.1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/004/335/GCF_000004335.2_AilMel_1.0/GCF_000004335.2_AilMel_1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/181/275/GCF_000181275.1_SorAra2.0/GCF_000181275.1_SorAra2.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/233/375/GCF_000233375.1_ICSASG_v2/GCF_000233375.1_ICSASG_v2_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/260/355/GCF_000260355.1_ConCri1.0/GCF_000260355.1_ConCri1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/292/845/GCF_000292845.1_OchPri3.0/GCF_000292845.1_OchPri3.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/296/755/GCF_000296755.1_EriEur2.0/GCF_000296755.1_EriEur2.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/321/225/GCF_000321225.1_Oros_1.0/GCF_000321225.1_Oros_1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/331/955/GCF_000331955.2_Oorc_1.1/GCF_000331955.2_Oorc_1.1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/464/555/GCF_000464555.1_PanTig1.0/GCF_000464555.1_PanTig1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/696/695/GCF_000696695.1_Burgud/GCF_000696695.1_Burgud_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/767/855/GCF_000767855.1_Ca_bactrianus_MBC_1.0/GCF_000767855.1_Ca_bactrianus_MBC_1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/000/803/125/GCF_000803125.2_CamDro3/GCF_000803125.2_CamDro3_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/001/857/705/GCF_001857705.1_PanPar1.0/GCF_001857705.1_PanPar1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/002/288/925/GCF_002288925.2_ASM228892v3/GCF_002288925.2_ASM228892v3_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/002/742/125/GCF_002742125.1_Oar_rambouillet_v1.0/GCF_002742125.1_Oar_rambouillet_v1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/003/265/705/GCF_003265705.1_ASM326570v1/GCF_003265705.1_ASM326570v1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/003/584/765/GCF_003584765.1_ASM358476v1/GCF_003584765.1_ASM358476v1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/003/676/395/GCF_003676395.1_ASM367639v1/GCF_003676395.1_ASM367639v1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/004/348/235/GCF_004348235.1_GSC_HSeal_1.0/GCF_004348235.1_GSC_HSeal_1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/005/190/385/GCF_005190385.1_NGI_Narwhal_1/GCF_005190385.1_NGI_Narwhal_1_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/007/474/595/GCF_007474595.1_mLynCan4_v1.p/GCF_007474595.1_mLynCan4_v1.p_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/009/834/535/GCF_009834535.1_BCGSAC_Cfer_1.0/GCF_009834535.1_BCGSAC_Cfer_1.0_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCF/009/829/155/GCF_009829155.1_mMusErm1.Pri/GCF_009829155.1_mMusErm1.Pri_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCA/019/903/745/GCA_019903745.1_ULRtarCaribou_2/GCA_019903745.1_ULRtarCaribou_2_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCA/004/026/855/GCA_004026855.1_LepAme_v1_BIUU/GCA_004026855.1_LepAme_v1_BIUU_genomic.fna.gzhttps://ftp.ncbi.nlm.nih.gov/genomes/all/
GCA/900/006/375/GCA_900006375.2_Gulo_2.2_annotated/GCA_900006375.2_Gulo_2.2_annotated_genomic.fna.gz
Not only that, note also that each of those compressed (e.g. zipped) files is multi gigabytes, totaling almost 900 gigs.
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| "I think of you as mostly bacteria" - Dr Bassler |
That may seem daunting, but the contents of just one of those files, GCF_011764305.1 ASM1176430v1 for example, is a bunch of smaller files:
NC_020638.1, NW_025421253.1, NW_025421254.1, NW_025421255.1, NW_025421256.1, NW_025421257.1, NW_025421258.1, NW_025421259.1, NW_025421260.1, NW_025421261.1, NW_025421262.1, NW_025421263.1, NW_025421264.1, NW_025421265.1, NW_025421266.1, NW_025421267.1, NW_025421268.1, NW_025421269.1, NW_025421270.1, NW_025421271.1, NW_025421272.1, NW_025421273.1, NW_025421274.1, NW_025421275.1, NW_025421276.1, NW_025421277.1, NW_025421278.1, NW_025421279.1, NW_025421280.1, NW_025421281.1, NW_025421282.1, NW_025421283.1, NW_025421284.1, NW_025421285.1, NW_025421286.1, NW_025421287.1, NW_025421288.1, NW_025421289.1, NW_025421290.1, NW_025421291.1, NW_025421292.1, NW_025421293.1, NW_025421294.1, NW_025421295.1, NW_025421296.1, NW_025421297.1, NW_025421298.1, NW_025421299.1, NW_025421300.1, NW_025421301.1, NW_025421302.1, NW_025421303.1, NW_025421304.1, NW_025421305.1, NW_025421306.1, NW_025421307.1, NW_025421308.1, NW_025421309.1, NW_025421310.1, NW_025421311.1, NW_025421312.1, NW_025421313.1, NW_025421314.1, NW_025421315.1, NW_025421316.1, NW_025421317.1, NW_025421318.1, NW_025421319.1, NW_025421320.1, NW_025421321.1, NW_025421322.1, NW_025421323.1, NW_025421324.1, NW_025421325.1, NW_025421326.1, NW_025421327.1, NW_025421328.1, NW_025421329.1, NW_025421330.1, NW_025421331.1, NW_025421332.1, NW_025421333.1, NW_025421334.1, NW_025421335.1, NW_025421336.1, NW_025421337.1, NW_025421338.1, NW_025421339.1, NW_025421340.1, NW_025421341.1, NW_025421342.1, NW_025421343.1, NW_025421344.1, NW_025421345.1, NW_025421346.1, NW_025421347.1, NW_025421348.1, NW_025421349.1, NW_025421350.1, NW_025421351.1, NW_025421352.1, NW_025421353.1, NW_025421354.1, NW_025421355.1, NW_025421356.1, NW_025421357.1, NW_025421358.1, NW_025421359.1, NW_025421360.1, NW_025421361.1, NW_025421362.1, NW_025421363.1, NW_025421364.1, NW_025421365.1, NW_025421366.1, NW_025421367.1, NW_025421368.1, NW_025421369.1, NW_025421370.1, NW_025421371.1, NW_025421372.1, NW_025421373.1, NW_025421374.1, NW_025421375.1, NW_025421376.1, NW_025421377.1, NW_025421378.1, NW_025421379.1, NW_025421380.1, NW_025421381.1, NW_025421382.1, NW_025421383.1, NW_025421384.1, NW_025421385.1, NW_025421386.1, NW_025421387.1, NW_025421388.1, NW_025421389.1, NW_025421390.1, NW_025421391.1, NW_025421392.1, NW_025421393.1, NW_025421394.1, NW_025421395.1, NW_025421396.1, NW_025421397.1, NW_025421398.1, NW_025421399.1, NW_025421400.1, NW_025421401.1, NW_025421402.1, NW_025421403.1, NW_025421404.1, NW_025421405.1, NW_025421406.1, NW_025421407.1, NW_025421408.1, NW_025421409.1, NW_025421410.1, NW_025421411.1, NW_025421412.1, NW_025421413.1, NW_025421414.1, NW_025421415.1, NW_025421416.1, NW_025421417.1, NW_025421418.1, NW_025421419.1, NW_025421420.1, NW_025421421.1, NW_025421422.1, NW_025421423.1, NW_025421424.1, NW_025421425.1, NW_025421426.1, NW_025421427.1, NW_025421428.1, NW_025421429.1, NW_025421430.1, NW_025421431.1, NW_025421432.1, NW_025421433.1, NW_025421434.1, NW_025421435.1, NW_025421436.1, NW_025421437.1, NW_025421438.1, NW_025421439.1, NW_025421440.1, NW_025421441.1, NW_025421442.1, NW_025421443.1, NW_025421444.1, NW_025421445.1, NW_025421446.1, NW_025421447.1, NW_025421448.1, NW_025421449.1, NW_025421450.1, NW_025421451.1, NW_025421452.1, NW_025421453.1, NW_025421454.1, NW_025421455.1, NW_025421456.1, NW_025421457.1, NW_025421458.1, NW_025421459.1, NW_025421460.1, NW_025421461.1, NW_025421462.1, NW_025421463.1, NW_025421464.1, NW_025421465.1, NW_025421466.1, NW_025421467.1, NW_025421468.1, NW_025421469.1, NW_025421470.1, NW_025421471.1, NW_025421472.1, NW_025421473.1, NW_025421474.1, NW_025421475.1, NW_025421476.1, NW_025421477.1, NW_025421478.1, NW_025421479.1, NW_025421480.1, NW_025421481.1, NW_025421482.1, NW_025421483.1, NW_025421484.1, NW_025421485.1, NW_025421486.1, NW_025421487.1, NW_025421488.1, NW_025421489.1, NW_025421490.1, NW_025421491.1, NW_025421492.1, NW_025421493.1, NW_025421494.1, NW_025421495.1, NW_025421496.1, NW_025421497.1, NW_025421498.1, NW_025421499.1, NW_025421500.1, NW_025421501.1, NW_025421502.1, NW_025421503.1, NW_025421504.1, NW_025421505.1, NW_025421506.1, NW_025421507.1, NW_025421508.1, NW_025421509.1, NW_025421510.1, NW_025421511.1, NW_025421512.1, NW_025421513.1, NW_025421514.1, NW_025421515.1, NW_025421516.1, NW_025421517.1, NW_025421518.1, NW_025421519.1, NW_025421520.1, NW_025421521.1, NW_025421522.1, NW_025421523.1, NW_025421524.1, NW_025421525.1, NW_025421526.1, NW_025421527.1, NW_025421528.1, NW_025421529.1, NW_025421530.1, NW_025421531.1, NW_025421532.1, NW_025421533.1, NW_025421534.1, NW_025421535.1, NW_025421536.1, NW_025421537.1, NW_025421538.1, NW_025421539.1, NW_025421540.1, NW_025421541.1, NW_025421542.1, NW_025421543.1, NW_025421544.1, NW_025421545.1, NW_025421546.1, NW_025421547.1, NW_025421548.1, NW_025421549.1, NW_025421550.1, NW_025421551.1, NW_025421552.1, NW_025421553.1, NW_025421554.1, NW_025421555.1, NW_025421556.1, NW_025421557.1, NW_025421558.1, NW_025421559.1, NW_025421560.1, NW_025421561.1, NW_025421562.1, NW_025421563.1, NW_025421564.1, NW_025421565.1, NW_025421566.1, NW_025421567.1, NW_025421568.1, NW_025421569.1, NW_025421570.1, NW_025421571.1, NW_025421572.1, NW_025421573.1, NW_025421574.1, NW_025421575.1, NW_025421576.1, NW_025421577.1, NW_025421578.1, NW_025421579.1, NW_025421580.1, NW_025421581.1, NW_025421582.1, NW_025421583.1, NW_025421584.1, NW_025421585.1, NW_025421586.1, NW_025421587.1, NW_025421588.1, NW_025421589.1, NW_025421590.1, NW_025421591.1, NW_025421592.1, NW_025421593.1, NW_025421594.1, NW_025421595.1, NW_025421596.1, NW_025421597.1, NW_025421598.1, NW_025421599.1, NW_025421600.1, NW_025421601.1, NW_025421602.1, NW_025421603.1, NW_025421604.1, NW_025421605.1, NW_025421606.1, NW_025421607.1, NW_025421608.1, NW_025421609.1, NW_025421610.1, NW_025421611.1, NW_025421612.1, NW_025421613.1, NW_025421614.1, NW_025421615.1, NW_025421616.1, NW_025421617.1, NW_025421618.1, NW_025421619.1, NW_025421620.1, NW_025421621.1, NW_025421622.1, NW_025421623.1, NW_025421624.1, NW_025421625.1, NW_025421626.1, NW_025421627.1, NW_025421628.1, NW_025421629.1, NW_025421630.1, NW_025421631.1, NW_025421632.1, NW_025421633.1, NW_025421634.1, NW_025421635.1, NW_025421636.1, NW_025421637.1, NW_025421638.1, NW_025421639.1, NW_025421640.1, NW_025421641.1, NW_025421642.1, NW_025421643.1, NW_025421644.1, NW_025421645.1, NW_025421646.1, NW_025421647.1, NW_025421648.1, NW_025421649.1, NW_025421650.1, NW_025421651.1, NW_025421652.1, NW_025421653.1, NW_025421654.1, NW_025421655.1, NW_025421656.1, NW_025421657.1, NW_025421658.1, NW_025421659.1, NW_025421660.1, NW_025421661.1, NW_025421662.1, NW_025421663.1, NW_025421664.1, NW_025421665.1, NW_025421666.1, NW_025421667.1, NW_025421668.1, NW_025421669.1, NW_025421670.1, NW_025421671.1, NW_025421672.1, NW_025421673.1, NW_025421674.1, NW_025421675.1, NW_025421676.1, NW_025421677.1, NW_025421678.1, NW_025421679.1, NW_025421680.1, NW_025421681.1, NW_025421682.1, NW_025421683.1, NW_025421684.1, NW_025421685.1, NW_025421686.1, NW_025421687.1, NW_025421688.1, NW_025421689.1, NW_025421690.1, NW_025421691.1, NW_025421692.1, NW_025421693.1, NW_025421694.1, NW_025421695.1, NW_025421696.1, NW_025421697.1, NW_025421698.1, NW_025421699.1, NW_025421700.1, NW_025421701.1, NW_025421702.1, NW_025421703.1, NW_025421704.1, NW_025421705.1, NW_025421706.1, NW_025421707.1, NW_025421708.1, NW_025421709.1, NW_025421710.1, NW_025421711.1, NW_025421712.1, NW_025421713.1, NW_025421714.1, NW_025421715.1, NW_025421716.1, NW_025421717.1, NW_025421718.1, NW_025421719.1, NW_025421720.1, NW_025421721.1, NW_025421722.1, NW_025421723.1, NW_025421724.1, NW_025421725.1, NW_025421726.1, NW_025421727.1, NW_025421728.1, NW_025421729.1, NW_025421730.1, NW_025421731.1, NW_025421732.1, NW_025421733.1, NW_025421734.1, NW_025421735.1, NW_025421736.1, NW_025421737.1, NW_025421738.1, NW_025421739.1, NW_025421740.1, NW_025421741.1, NW_025421742.1, NW_025421743.1, NW_025421744.1, NW_025421745.1, NW_025421746.1, NW_025421747.1, NW_025421748.1, NW_025421749.1, NW_025421750.1, NW_025421751.1, NW_025421752.1, NW_025421753.1, NW_025421754.1, NW_025421755.1, NW_025421756.1, NW_025421757.1, NW_025421758.1, NW_025421759.1, NW_025421760.1, NW_025421761.1, NW_025421762.1, NW_025421763.1, NW_025421764.1, NW_025421765.1, NW_025421766.1, NW_025421767.1, NW_025421768.1, NW_025421769.1, NW_025421770.1, NW_025421771.1, NW_025421772.1, NW_025421773.1, NW_025421774.1, NW_025421775.1, NW_025421776.1, NW_025421777.1, NW_025421778.1, NW_025421779.1, NW_025421780.1, NW_025421781.1, NW_025421782.1, NW_025421783.1, NW_025421784.1, NW_025421785.1, NW_025421786.1, NW_025421787.1, NW_025421788.1, NW_025421789.1, NW_025421790.1, NW_025421791.1, NW_025421792.1, NW_025421793.1, NW_025421794.1, NW_025421795.1, NW_025421796.1, NW_025421797.1, NW_025421798.1, NW_025421799.1, NW_025421800.1, NW_025421801.1, NW_025421802.1, NW_025421803.1, NW_025421804.1, NW_025421805.1, NW_025421806.1, NW_025421807.1, NW_025421808.1, NW_025421809.1, NW_025421810.1, NW_025421811.1, NW_025421812.1, NW_025421813.1, NW_025421814.1, NW_025421815.1, NW_025421816.1, NW_025421817.1, NW_025421818.1, NW_025421819.1, NW_025421820.1, NW_025421821.1, NW_025421822.1, NW_025421823.1, NW_025421824.1, NW_025421825.1, NW_025421826.1, NW_025421827.1, NW_025421828.1, NW_025421829.1, NW_025421830.1, NW_025421831.1, NW_025421832.1, NW_025421833.1, NW_025421834.1, NW_025421835.1, NW_025421836.1, NW_025421837.1, NW_025421838.1, NW_025421839.1, NW_025421840.1, NW_025421841.1, NW_025421842.1, NW_025421843.1, NW_025421844.1, NW_025421845.1, NW_025421846.1, NW_025421847.1, NW_025421848.1, NW_025421849.1, NW_025421850.1, NW_025421851.1, NW_025421852.1, NW_025421853.1, NW_025421854.1, NW_025421855.1, NW_025421856.1, NW_025421857.1, NW_025421858.1, NW_025421859.1, NW_025421860.1, NW_025421861.1, NW_025421862.1, NW_025421863.1, NW_025421864.1, NW_025421865.1, NW_025421866.1, NW_025421867.1, NW_025421868.1, NW_025421869.1, NW_025421870.1, NW_025421871.1, NW_025421872.1, NW_025421873.1, NW_025421874.1, NW_025421875.1, NW_025421876.1, NW_025421877.1, NW_025421878.1, NW_025421879.1, NW_025421880.1, NW_025421881.1, NW_025421882.1, NW_025421883.1, NW_025421884.1, NW_025421885.1, NW_025421886.1, NW_025421887.1, NW_025421888.1, NW_025421889.1, NW_025421890.1, NW_025421891.1, NW_025421892.1, NW_025421893.1, NW_025421894.1, NW_025421895.1, NW_025421896.1, NW_025421897.1, NW_025421898.1, NW_025421899.1, NW_025421900.1, NW_025421901.1, NW_025421902.1, NW_025421903.1, NW_025421904.1, NW_025421905.1, NW_025421906.1, NW_025421907.1, NW_025421908.1, NW_025421909.1, NW_025421910.1, NW_025421911.1, NW_025421912.1, NW_025421913.1, NW_025421914.1, NW_025421915.1, NW_025421916.1, NW_025421917.1, NW_025421918.1, NW_025421919.1, NW_025421920.1, NW_025421921.1, NW_025421922.1, NW_025421923.1, NW_025421924.1, NW_025421925.1, NW_025421926.1, NW_025421927.1, NW_025421928.1, NW_025421929.1, NW_025421930.1, NW_025421931.1, NW_025421932.1, NW_025421933.1, NW_025421934.1, NW_025421935.1, NW_025421936.1, NW_025421937.1, NW_025421938.1, NW_025421939.1, NW_025421940.1, NW_025421941.1, NW_025421942.1, NW_025421943.1, NW_025421944.1, NW_025421945.1, NW_025421946.1, NW_025421947.1, NW_025421948.1, NW_025421949.1, NW_025421950.1, NW_025421951.1, NW_025421952.1, NW_025421953.1, NW_025421954.1, NW_025421955.1, NW_025421956.1, NW_025421957.1, NW_025421958.1, NW_025421959.1, NW_025421960.1, NW_025421961.1, NW_025421962.1, NW_025421963.1, NW_025421964.1, NW_025421965.1, NW_025421966.1, NW_025421967.1, NW_025421968.1, NW_025421969.1, NW_025421970.1, NW_025421971.1, NW_025421972.1, NW_025421973.1, NW_025421974.1, NW_025421975.1, NW_025421976.1, NW_025421977.1, NW_025421978.1, NW_025421979.1, NW_025421980.1, NW_025421981.1, NW_025421982.1, NW_025421983.1, NW_025421984.1, NW_025421985.1, NW_025421986.1, NW_025421987.1, NW_025421988.1, NW_025421989.1, NW_025421990.1, NW_025421991.1, NW_025421992.1, NW_025421993.1, NW_025421994.1, NW_025421995.1, NW_025421996.1, NW_025421997.1, NW_025421998.1, NW_025421999.1, NW_025422000.1, NW_025422001.1, NW_025422002.1, NW_025422003.1, NW_025422004.1, NW_025422005.1, NW_025422006.1, NW_025422007.1, NW_025422008.1, NW_025422009.1, NW_025422010.1, NW_025422011.1, NW_025422012.1, NW_025422013.1, NW_025422014.1, NW_025422015.1, NW_025422016.1, NW_025422017.1, NW_025422018.1, NW_025422019.1, NW_025422020.1, NW_025422021.1, NW_025422022.1, NW_025422023.1, NW_025422024.1, NW_025422025.1, NW_025422026.1, NW_025422027.1, NW_025422028.1, NW_025422029.1, NW_025422030.1, NW_025422031.1, NW_025422032.1, NW_025422033.1, NW_025422034.1, NW_025422035.1, NW_025422036.1, NW_025422037.1, NW_025422038.1, NW_025422039.1, NW_025422040.1, NW_025422041.1, NW_025422042.1, NW_025422043.1, NW_025422044.1, NW_025422045.1, NW_025422046.1, NW_025422047.1, NW_025422048.1, NW_025422049.1, NW_025422050.1, NW_025422051.1, NW_025422052.1, NW_025422053.1, NW_025422054.1, NW_025422055.1, NW_025422056.1, NW_025422057.1, NW_025422058.1, NW_025422059.1, NW_025422060.1, NW_025422061.1, NW_025422062.1, NW_025422063.1, NW_025422064.1, NW_025422065.1, NW_025422066.1, NW_025422067.1, NW_025422068.1, NW_025422069.1, NW_025422070.1, NW_025422071.1, NW_025422072.1, NW_025422073.1, NW_025422074.1, NW_025422075.1, NW_025422076.1, NW_025422077.1, NW_025422078.1, NW_025422079.1, NW_025422080.1, NW_025422081.1, NW_025422082.1, NW_025422083.1, NW_025422084.1, NW_025422085.1, NW_025422086.1, NW_025422087.1, NW_025422088.1, NW_025422089.1, NW_025422090.1, NW_025422091.1, NW_025422092.1, NW_025422093.1, NW_025422094.1, NW_025422095.1, NW_025422096.1, NW_025422097.1, NW_025422098.1, NW_025422099.1, NW_025422100.1, NW_025422101.1, NW_025422102.1, NW_025422103.1, NW_025422104.1, NW_025422105.1, NW_025422106.1, NW_025422107.1, NW_025422108.1, NW_025422109.1, NW_025422110.1, NW_025422111.1, NW_025422112.1, NW_025422113.1, NW_025422114.1, NW_025422115.1, NW_025422116.1, NW_025422117.1, NW_025422118.1, NW_025422119.1, NW_025422120.1, NW_025422121.1, NW_025422122.1, NW_025422123.1, NW_025422124.1, NW_025422125.1, NW_025422126.1, NW_025422127.1, NW_025422128.1, NW_025422129.1, NW_025422130.1, NW_025422131.1, NW_025422132.1, NW_025422133.1, NW_025422134.1, NW_025422135.1, NW_025422136.1, NW_025422137.1, NW_025422138.1, NW_025422139.1, NW_025422140.1, NW_025422141.1, NW_025422142.1, NW_025422143.1, NW_025422144.1, NW_025422145.1, NW_025422146.1, NW_025422147.1, NW_025422148.1, NW_025422149.1, NW_025422150.1, NW_025422151.1, NW_025422152.1, NW_025422153.1, NW_025422154.1, NW_025422155.1, NW_025422156.1, NW_025422157.1, NW_025422158.1, NW_025422159.1, NW_025422160.1, NW_025422161.1, NW_025422162.1, NW_025422163.1, NW_025422164.1, NW_025422165.1, NW_025422166.1, NW_025422167.1, NW_025422168.1, NW_025422169.1, NW_025422170.1, NW_025422171.1, NW_025422172.1, NW_025422173.1, NW_025422174.1, NW_025422175.1, NW_025422176.1, NW_025422177.1, NW_025422178.1, NW_025422179.1, NW_025422180.1, NW_025422181.1, NW_025422182.1, NW_025422183.1, NW_025422184.1, NW_025422185.1, NW_025422186.1, NW_025422187.1, NW_025422188.1, NW_025422189.1, NW_025422190.1, NW_025422191.1, NW_025422192.1, NW_025422193.1, NW_025422194.1, NW_025422195.1, NW_025422196.1, NW_025422197.1, NW_025422198.1, NW_025422199.1, NW_025422200.1, NW_025422201.1, NW_025422202.1, NW_025422203.1, NW_025422204.1, NW_025422205.1, NW_025422206.1, NW_025422207.1, NW_025422208.1, NW_025422209.1, NW_025422210.1, NW_025422211.1, NW_025422212.1, NW_025422213.1, NW_025422214.1, NW_025422215.1, NW_025422216.1, NW_025422217.1, NW_025422218.1, NW_025422219.1, NW_025422220.1, NW_025422221.1, NW_025422222.1, NW_025422223.1, NW_025422224.1, NW_025422225.1, NW_025422226.1, NW_025422227.1, NW_025422228.1, NW_025422229.1, NW_025422230.1, NW_025422231.1, NW_025422232.1, NW_025422233.1, NW_025422234.1, NW_025422235.1, NW_025422236.1, NW_025422237.1, NW_025422238.1, NW_025422239.1, NW_025422240.1, NW_025422241.1, NW_025422242.1, NW_025422243.1, NW_025422244.1, NW_025422245.1, NW_025422246.1, NW_025422247.1, NW_025422248.1, NW_025422249.1, NW_025422250.1, NW_025422251.1, NW_025422252.1, NW_025422253.1, NW_025422254.1, NW_025422255.1, NW_025422256.1, NW_025422257.1, NW_025422258.1, NW_025422259.1, NW_025422260.1, NW_025422261.1, NW_025422262.1, NW_025422263.1, NW_025422264.1, NW_025422265.1, NW_025422266.1, NW_025422267.1, NW_025422268.1, NW_025422269.1, NW_025422270.1, NW_025422271.1, NW_025422272.1, NW_025422273.1, NW_025422274.1, NW_025422275.1, NW_025422276.1, NW_025422277.1, NW_025422278.1, NW_025422279.1, NW_025422280.1, NW_025422281.1, NW_025422282.1, NW_025422283.1, NW_025422284.1, NW_025422285.1, NW_025422286.1, NW_025422287.1, NW_025422288.1, NW_025422289.1, NW_025422290.1, NW_025422291.1, NW_025422292.1, NW_025422293.1, NW_025422294.1, NW_025422295.1, NW_025422296.1, NW_025422297.1, NW_025422298.1, NW_025422299.1, NW_025422300.1, NW_025422301.1, NW_025422302.1, NW_025422303.1, NW_025422304.1, NW_025422305.1, NW_025422306.1, NW_025422307.1, NW_025422308.1, NW_025422309.1, NW_025422310.1, NW_025422311.1, NW_025422312.1, NW_025422313.1, NW_025422314.1, NW_025422315.1, NW_025422316.1, NW_025422317.1, NW_025422318.1, NW_025422319.1, NW_025422320.1, NW_025422321.1, NW_025422322.1, NW_025422323.1, NW_025422324.1, NW_025422325.1, NW_025422326.1, NW_025422327.1, NW_025422328.1, NW_025422329.1, NW_025422330.1, NW_025422331.1, NW_025422332.1, NW_025422333.1, NW_025422334.1, NW_025422335.1, NW_025422336.1, NW_025422337.1, NW_025422338.1, NW_025422339.1, NW_025422340.1, NW_025422341.1, NW_025422342.1, NW_025422343.1, NW_025422344.1, NW_025422345.1, NW_025422346.1, NW_025422347.1, NW_025422348.1, NW_025422349.1, NW_025422350.1, NW_025422351.1, NW_025422352.1, NW_025422353.1, NW_025422354.1, NW_025422355.1, NW_025422356.1, NW_025422357.1, NW_025422358.1, NW_025422359.1, NW_025422360.1, NW_025422361.1, NW_025422362.1, NW_025422363.1, NW_025422364.1, NW_025422365.1, NW_025422366.1, NW_025422367.1, NW_025422368.1, NW_025422369.1, NW_025422370.1, NW_025422371.1, NW_025422372.1, NW_025422373.1, NW_025422374.1, NW_025422375.1, NW_025422376.1, NW_025422377.1, NW_025422378.1, NW_025422379.1, NW_025422380.1, NW_025422381.1, NW_025422382.1, NW_025422383.1, NW_025422384.1, NW_025422385.1, NW_025422386.1, NW_025422387.1, NW_025422388.1, NW_025422389.1, NW_025422390.1, NW_025422391.1, NW_025422392.1, NW_025422393.1, NW_025422394.1, NW_025422395.1, NW_025422396.1, NW_025422397.1, NW_025422398.1, NW_025422399.1, NW_025422400.1, NW_025422401.1, NW_025422402.1, NW_025422403.1, NW_025422404.1, NW_025422405.1, NW_025422406.1, NW_025422407.1, NW_025422408.1, NW_025422409.1, NW_025422410.1, NW_025422411.1, NW_025422412.1, NW_025422413.1, NW_025422414.1, NW_025422415.1, NW_025422416.1, NW_025422417.1, NW_025422418.1, NW_025422419.1, NW_025422420.1, NW_025422421.1, NW_025422422.1, NW_025422423.1, NW_025422424.1, NW_025422425.1, NW_025422426.1, NW_025422427.1, NW_025422428.1, NW_025422429.1, NW_025422430.1, NW_025422431.1, NW_025422432.1, NW_025422433.1, NW_025422434.1, NW_025422435.1, NW_025422436.1, NW_025422437.1, NW_025422438.1, NW_025422439.1, NW_025422440.1, NW_025422441.1, NW_025422442.1, NW_025422443.1, NW_025422444.1, NW_025422445.1, NW_025422446.1, NW_025422447.1, NW_025422448.1, NW_025422449.1, NW_025422450.1, NW_025422451.1, NW_025422452.1, NW_025422453.1, NW_025422454.1, NW_025422455.1, NW_025422456.1, NW_025422457.1, NW_025422458.1, NW_025422459.1, NW_025422460.1, NW_025422461.1, NW_025422462.1, NW_025422463.1, NW_025422464.1, NW_025422465.1, NW_025422466.1, NW_025422467.1, NW_025422468.1, NW_025422469.1, NW_025422470.1, NW_025422471.1, NW_025422472.1, NW_025422473.1, NW_025422474.1, NW_025422475.1
Each one of those one thousand some odd number of files is a FASTA (".fasta") file with a separate list of DNA nucleotides ("ACTG's") which make up a separate set of Tataboxes containing a list of "start-codon" to "stop-codon" strands.
III. Human Segments / Animal Segments?
So far in this series I have processed only nine of the compressed FNA (".fna.gz") files, which contain over a million such speculated eDNA Greenland strands EACH.
The "human DNA" matches found in those files are few in comparison:
eDNA version GCF_000292845.1 segments were found in human DNA:
|ATG*GGA*CAG*AGG*CCT*GGG*GAA*GCT*CTG*CAA*CAC*AGA*CTT*TTA*ACT*CAG*GGG*CAT*GTA*TAG|
|ATG*GCC*GAG*CGG*TCT*AAG*GCG*CTG*CGT*TCA*GGT*CGC*AGT*CTC*CCC*TGG*AGG*CGT*GGG*TTC*GAA*TCC*CAC*TCC*TGA|
eDNA version GCF_000260355.1 segments were found in human DNA:
|ATG*TCT*TCT*AGT*ATT*TTG*CTT*TCA*AAT*TGT*GTC*TCC*TGC*CAT*TTG*TGC*CAC*ATT*TAA|
|ATG*CAA*TTA*ACG*GCA*CCA*ACA*TTT*ACA*AAA*TAT*GAT*TAC*AAG*CGC*TTT*GGT*TAA|
|ATG*TGC*ATT*TTT*TCG*AGA*GAC*TTG*CAT*TTT*CTT*TGT*GCA*AAT*AAA*GAG*GCC*CTA*AAT*TCT*CCA*TAG|
|ATG*CAG*TGG*AAC*CAT*GAT*AAC*AAA*CAC*AGG*CTC*CAC*TTT*TTG*CTA*CAT*CCC*CCA*ATT*AAT*TAA|
|ATG*AGA*ACA*TAT*GAG*AGA*GTA*TTA*ACA*GAA*AGG*CAC*ACT*TTG*ATT*TAC*TGA|
|ATG*AAC*TCA*GGG*GGC*AGG*GAG*GGC*AGC*TGG*ATG*AGG*GTG*GAG*CCT*GGG*GGG*CGG*GTC*TGA|
eDNA version GCF_000181275.1 segments were found in human DNA:
|ATG*TCA*CAA*ACT*ATA*AAG*CTA*CAG*GGA*GGT*AAT*TCA*ATT*ACC*AAT*TTA*GAG*GTT*TTC*TTT*TTA*TTT*AAA*TAA|
|ATG*TCA*TTA*AGG*CTT*TTG*TCT*GCG*CTG*TTT*TTG*TTT*CAG*AAC*TTT*TCT*CAC*AAT*CCT*ATT*TTT*TGT*TGA|
eDNA version GCF_000233375.1 segments were NOT found in human DNA
eDNA version GCF_000296755.1 segments were found in human DNA:
|ATG*ATA*ATT*GGA*CAT*TTA*GTG*CTC*GTC*AAA*CAG*AAA*GTG*ACA*GAT*GGG*GCA*CTA*ATT*AAA*TTA*TAG|
eDNA version GCF_000696695.1 segments were found in human DNA:
|ATG*GTG*CAA*TCT*GTG*GCT*TTG*GAA*CAG*AGT*TCT*TCT*CTA*TGT*GAA*ACT*AAT*TGG*CCC*ATA*TGG*GGA*TTA*AAC*TGG*TAA|
|ATG*TCT*CCC*TGT*TGT*GGG*TCA*TTG*CCG*GTT*CGT*CTA*AAT*AAA*CTG*CTT*CCA*AAT*GGC*TCT*TCC*ATC*TAA|
|ATG*CGT*TAT*CAG*GCC*ACA*GCA*GTT*GGG*CCC*TGC*CAC*ATT*GAT*TTT*TTG*CTG*TGA|
eDNA version GCF_000767855.1 segments were found in human DNA:
|ATG*TCA*CAA*ACT*ATA*AAG*CTA*CAG*GGA*GGT*AAT*TCA*ATT*ACC*AAT*TTA*GAG*GTT*TTC*TTT*TTA*TTT*AAA*TAA|
|ATG*TCA*TTA*AGG*CTT*TTG*TCT*GCG*CTG*TTT*TTG*TTT*CAG*AAC*TTT*TCT*CAC*AAT*CCT*ATT*TTT*TGT*TGA|
eDNA version GCF_002863925.1 segments were found in human DNA:
|ATG*CGT*TAT*CAG*GCC*ACA*GCA*GTT*GGG*CCC*TGC*CAC*ATT*GAT*TTT*TTG*CTG*TGA|
|ATG*GCG*TCC*CAT*CAA*ACA*TAC*ACT*GCG*ACC*CTG*CAT*CAC*ATG*GTT*TTA*CAG*TCA*TAA|
|ATG*GGG*GGA*GTC*ACG*CTA*CAT*AGC*CGC*TGT*AAT*ACC*GAA*TGG*CCT*GAT*TAA|
|ATG*TCT*CCC*TGT*TGT*GGG*TCA*TTG*CCG*GTT*CGT*CTA*AAT*AAA*CTG*CTT*CCA*AAT*GGC*TCT*TCC*ATC*TAA|
eDNA version GCF_003160815.1 segments were found in human DNA:
|ATG*ATA*TTT*TTC*TGC*AAA*CTA*TCA*TCT*TTT*CTG*GTT*CAT*TTT*CAA*GAT*CTT*TGA|
|ATG*TTT*GGT*GTA*AAG*TTG*AGA*CCC*TTT*TCC*ATT*TTG*GTG*ACA*GAT*TTC*TTT*GGG*GAA*AAA*AGG*CAG*CTT*TCT*GTT*TTA*TAA|
|ATG*AGT*TTG*CTT*CAG*CAT*CCA*AAC*TGG*AGA*AAA*GCT*TTA*GCC*ATT*AAT*CGG*TTC*TTA*ATT*CAC*TGT*CGC*AGC*TGG*ATG*TAA|
|ATG*ATA*ATT*GGA*CAT*TTA*GTG*CTC*GTC*AAA*CAG*AAA*GTG*ACA*GAT*GGG*GCA*CTA*ATT*AAA*TTA*TAG|
But the search is worth it because the question asked by the title of this series is important: "Human DNA Found In 2-3 Mya eDNA?".
So, on to the next nine files because if in fact there were hominins in that Greenland ecosystem way back when, it should be known eh?
In other words, if those animal DNA segments are also in human DNA segments now, shouldn't we search for them in eDNA from way back then?
Too daunting?
The prevous post in this series is here:
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