Thursday, August 17, 2023

APDX SBC SARS-CoV-2

This is an appendix to: Small Brains Considered - 15





Full-Genome Table (RNA)
Link and genome info: LC542976.1
Severe acute respiratory syndrome coronavirus 2 TKYE6968_2020 RNA
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,903

Atom Atom Count Percent
Carbon 134,429 32.4207
Hydrogen 139,919 33.7447
Nitrogen 109,747 26.4680
Oxygen 30,545 7.3666
Totals 414,640 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4487
Hydrogen 69,394 33.7047
Nitrogen 54,280 26.3638
Oxygen 15,406 7.4827
Totals 205,888 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4486
Hydrogen 69,372 33.7050
Nitrogen 54,264 26.3647
Oxygen 15,399 7.4817
Totals 205,821 -----



Full-Genome Table (RNA)
Link and genome info: MT039874.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/IME-HZ01/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,858

Atom Atom Count Percent
Carbon 134,209 32.4192
Hydrogen 139,701 33.7458
Nitrogen 109,539 26.4600
Oxygen 30,531 7.3750
Totals 413,980 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4484
Hydrogen 69,396 33.7054
Nitrogen 54,282 26.3646
Oxygen 15,404 7.4817
Totals 205,890 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4483
Hydrogen 69,374 33.7057
Nitrogen 54,266 26.3654
Oxygen 15,397 7.4807
Totals 205,823 -----



Full-Genome Table (RNA)
Link and genome info: MT240479.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/PAK/Gilgit1/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,836

Atom Atom Count Percent
Carbon 134,111 32.4199
Hydrogen 139,590 33.7444
Nitrogen 109,452 26.4588
Oxygen 30,516 7.3769
Totals 413,669 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,807 32.4487
Hydrogen 69,394 33.7052
Nitrogen 54,278 26.3633
Oxygen 15,406 7.4828
Totals 205,885 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,785 32.4486
Hydrogen 69,372 33.7055
Nitrogen 54,262 26.3641
Oxygen 15,399 7.4819
Totals 205,818 -----



Full-Genome Table (RNA)
Link and genome info: MT259268.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW276/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,758
'N' Unknown Count: 1

Atom Atom Count Percent
Carbon 133,785 32.4207
Hydrogen 139,241 33.7429
Nitrogen 109,231 26.4704
Oxygen 30,396 7.3660
Totals 412,653 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4486
Hydrogen 69,395 33.7051
Nitrogen 54,281 26.3642
Oxygen 15,405 7.4822
Totals 205,889 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4484
Hydrogen 69,373 33.7053
Nitrogen 54,265 26.3650
Oxygen 15,398 7.4812
Totals 205,822 -----



Full-Genome Table (RNA)
Link and genome info: MT246489.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW232/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,863
'N' Unknown Count: 1

Atom Atom Count Percent
Carbon 134,258 32.4211
Hydrogen 139,734 33.7435
Nitrogen 109,620 26.4714
Oxygen 30,495 7.3640
Totals 414,107 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4486
Hydrogen 69,395 33.7051
Nitrogen 54,281 26.3642
Oxygen 15,405 7.4822
Totals 205,889 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4484
Hydrogen 69,373 33.7053
Nitrogen 54,265 26.3650
Oxygen 15,398 7.4812
Totals 205,822 -----



Full-Genome Table (RNA)
Link and genome info: MT253700.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/HZ-481/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,781

Atom Atom Count Percent
Carbon 133,868 32.4194
Hydrogen 139,340 33.7445
Nitrogen 109,266 26.4614
Oxygen 30,452 7.3747
Totals 412,926 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4484
Hydrogen 69,396 33.7054
Nitrogen 54,282 26.3646
Oxygen 15,404 7.4817
Totals 205,890 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4483
Hydrogen 69,374 33.7057
Nitrogen 54,266 26.3654
Oxygen 15,397 7.4807
Totals 205,823 -----



Full-Genome Table (RNA)
Link and genome info: MT039887.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WI-CDC-WI1/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,879

Atom Atom Count Percent
Carbon 134,311 32.4198
Hydrogen 139,802 33.7452
Nitrogen 109,634 26.4633
Oxygen 30,540 7.3717
Totals 414,287 -----



Tatabox Table
Nucleotide count: 14,870

Atom Atom Count Percent
Carbon 66,795 32.4482
Hydrogen 69,383 33.7054
Nitrogen 54,273 26.3652
Oxygen 15,400 7.4811
Totals 205,851 -----



Clean Tatabox Table
Nucleotide count: 14,865
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,773 32.4481
Hydrogen 69,361 33.7057
Nitrogen 54,257 26.3660
Oxygen 15,393 7.4802
Totals 205,784 -----



Full-Genome Table (RNA)
Link and genome info: MT259271.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW279/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,864

Atom Atom Count Percent
Carbon 134,237 32.4195
Hydrogen 139,727 33.7453
Nitrogen 109,561 26.4600
Oxygen 30,538 7.3752
Totals 414,063 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4484
Hydrogen 69,396 33.7054
Nitrogen 54,282 26.3646
Oxygen 15,404 7.4817
Totals 205,890 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4483
Hydrogen 69,374 33.7057
Nitrogen 54,266 26.3654
Oxygen 15,397 7.4807
Totals 205,823 -----



Full-Genome Table (RNA)
Link and genome info: MT159716.2
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/CDC-CruiseA-18/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,867

Atom Atom Count Percent
Carbon 134,257 32.4200
Hydrogen 139,747 33.7457
Nitrogen 109,591 26.4637
Oxygen 30,523 7.3706
Totals 414,118 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,807 32.4485
Hydrogen 69,395 33.7055
Nitrogen 54,279 26.3636
Oxygen 15,405 7.4823
Totals 205,886 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,785 32.4484
Hydrogen 69,373 33.7058
Nitrogen 54,263 26.3644
Oxygen 15,398 7.4813
Totals 205,819 -----



Full-Genome Table (RNA)
Link and genome info: MT259253.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW261/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,813

Atom Atom Count Percent
Carbon 134,028 32.4205
Hydrogen 139,498 33.7437
Nitrogen 109,424 26.4690
Oxygen 30,455 7.3669
Totals 413,405 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4484
Hydrogen 69,395 33.7049
Nitrogen 54,281 26.3641
Oxygen 15,406 7.4826
Totals 205,890 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4483
Hydrogen 69,373 33.7052
Nitrogen 54,265 26.3649
Oxygen 15,399 7.4817
Totals 205,823 -----



Full-Genome Table (RNA)
Link and genome info: MT259251.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW259/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,883
'N' Unknown Count: 1

Atom Atom Count Percent
Carbon 134,343 32.4213
Hydrogen 139,822 33.7435
Nitrogen 109,678 26.4688
Oxygen 30,524 7.3664
Totals 414,367 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4486
Hydrogen 69,395 33.7051
Nitrogen 54,281 26.3642
Oxygen 15,405 7.4822
Totals 205,889 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4484
Hydrogen 69,373 33.7053
Nitrogen 54,265 26.3650
Oxygen 15,398 7.4812
Totals 205,822 -----



Full-Genome Table (RNA)
Link and genome info: MT252695.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW96/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,809
'N' Unknown Count: 10

Atom Atom Count Percent
Carbon 134,001 32.4204
Hydrogen 139,469 33.7433
Nitrogen 109,381 26.4638
Oxygen 30,472 7.3724
Totals 413,323 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4486
Hydrogen 69,395 33.7051
Nitrogen 54,281 26.3642
Oxygen 15,405 7.4822
Totals 205,889 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4484
Hydrogen 69,373 33.7053
Nitrogen 54,265 26.3650
Oxygen 15,398 7.4812
Totals 205,822 -----



Full-Genome Table (RNA)
Link and genome info: MT263413.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW333/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,857
'N' Unknown Count: 5

Atom Atom Count Percent
Carbon 134,214 32.4206
Hydrogen 139,693 33.7441
Nitrogen 109,551 26.4631
Oxygen 30,519 7.3721
Totals 413,977 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4486
Hydrogen 69,395 33.7051
Nitrogen 54,281 26.3642
Oxygen 15,405 7.4822
Totals 205,889 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4484
Hydrogen 69,373 33.7053
Nitrogen 54,265 26.3650
Oxygen 15,398 7.4812
Totals 205,822 -----



Full-Genome Table (RNA)
Link and genome info: MT066176.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/NTU02/TWN/human/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,870

Atom Atom Count Percent
Carbon 134,264 32.4194
Hydrogen 139,755 33.7453
Nitrogen 109,583 26.4599
Oxygen 30,545 7.3754
Totals 414,147 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4484
Hydrogen 69,395 33.7049
Nitrogen 54,281 26.3641
Oxygen 15,406 7.4826
Totals 205,890 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4483
Hydrogen 69,373 33.7052
Nitrogen 54,265 26.3649
Oxygen 15,399 7.4817
Totals 205,823 -----



Full-Genome Table (RNA)
Link and genome info: MT263412.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-UW332/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,821
'N' Unknown Count: 8

Atom Atom Count Percent
Carbon 134,062 32.4205
Hydrogen 139,533 33.7436
Nitrogen 109,447 26.4678
Oxygen 30,468 7.3681
Totals 413,510 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4486
Hydrogen 69,395 33.7051
Nitrogen 54,281 26.3642
Oxygen 15,405 7.4822
Totals 205,889 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4484
Hydrogen 69,373 33.7053
Nitrogen 54,265 26.3650
Oxygen 15,398 7.4812
Totals 205,822 -----



Full-Genome Table (RNA)
Link and genome info: MT114416.1
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/HKG/HKU-907a/2020
complete genome


Nucleotide ('A','C','G', 'U') Count: 29,867

Atom Atom Count Percent
Carbon 134,262 32.4202
Hydrogen 139,748 33.7449
Nitrogen 109,602 26.4655
Oxygen 30,519 7.3694
Totals 414,131 -----



Tatabox Table
Nucleotide count: 14,873

Atom Atom Count Percent
Carbon 66,808 32.4487
Hydrogen 69,394 33.7047
Nitrogen 54,280 26.3638
Oxygen 15,406 7.4827
Totals 205,888 -----



Clean Tatabox Table
Nucleotide count: 14,868
'N' Unknown Count: 5
'Chimera' Nucleotide Count: 5

Atom Atom Count Percent
Carbon 66,786 32.4486
Hydrogen 69,372 33.7050
Nitrogen 54,264 26.3647
Oxygen 15,399 7.4817
Totals 205,821 -----


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