Tuesday, September 15, 2020

Appendix Bovine

This is an appendix to: On The Origin of the Genes of Viruses - 15

The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

Coronaviridae (Bovine) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Han_2018_ERR1398074; 298,235 bases)
Corona
Virus Id		 Virus
Length		 Part
Type		 Part
Pos		 Part
Length		 Part
Match		 Segment
Matches
AF220295 31,100 gene 21,521 833 0 19
31,100 gene 22,366 1,274 0 32
31,100 gene 23,655 4,091 0 108
31,100 gene 28,438 254 0 10
31,100 gene 28,707 692 0 17
31,100 gene 29,409 1,346 0 38
AF391541 31,028 gene 21,504 836 0 19
31,028 gene 22,352 1,274 0 31
31,028 gene 23,641 4,091 0 110
31,028 gene 28,422 254 0 9
31,028 gene 28,691 692 0 18
31,028 gene 29,393 1,346 0 34
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 7
AF391542 31,028 gene 21,504 836 0 18
31,028 gene 22,352 1,274 0 33
31,028 gene 23,641 4,091 0 112
31,028 gene 28,422 254 0 8
31,028 gene 28,691 692 0 19
31,028 gene 29,393 1,346 0 33
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 7
DQ915164 31,076 gene 21,504 836 0 20
31,076 gene 22,352 1,274 0 30
31,076 gene 23,641 4,091 0 109
31,076 gene 28,106 329 0 7
31,076 gene 28,660 722 0 17
31,076 gene 29,392 1,346 0 35
31,076 5_UTR 1 209 0 6
31,076 3_UTR 30,994 82 0 6
EF424615 31,017 gene 211 13,151 0 325
31,017 gene 13,341 8,153 0 213
31,017 gene 21,504 836 0 19
31,017 gene 22,352 1,274 0 33
31,017 gene 23,641 4,091 0 113
31,017 gene 27,722 89 0 2
31,017 gene 27,889 137 0 1
31,017 gene 28,106 329 0 7
31,017 gene 28,422 254 0 9
31,017 gene 28,691 692 0 18
31,017 gene 29,393 1,346 0 35
EF424616 30,970 gene 195 13,151 0 328
30,970 gene 13,325 8,153 0 210
30,970 gene 21,488 836 0 19
30,970 gene 22,336 1,274 0 30
30,970 gene 23,625 4,091 0 110
30,970 gene 27,706 89 0 2
30,970 gene 27,873 137 0 2
30,970 gene 28,090 329 0 7
30,970 gene 28,406 254 0 9
30,970 gene 28,675 692 0 18
30,970 gene 29,377 1,346 0 34
EF424617 31,016 gene 195 13,151 0 328
31,016 gene 13,325 8,153 0 213
31,016 gene 21,488 836 0 19
31,016 gene 22,336 1,274 0 31
31,016 gene 23,625 4,091 0 109
31,016 gene 27,706 89 0 2
31,016 gene 27,873 137 0 2
31,016 gene 28,090 329 0 7
31,016 gene 28,406 254 0 9
31,016 gene 28,675 692 0 18
31,016 gene 29,377 1,346 0 34
EF424618 30,995 gene 195 13,151 0 329
30,995 gene 13,325 8,153 0 213
30,995 gene 21,488 836 0 19
30,995 gene 22,336 1,274 0 31
30,995 gene 23,625 4,091 0 109
30,995 gene 27,706 89 0 2
30,995 gene 27,873 137 0 2
30,995 gene 28,090 329 0 7
30,995 gene 28,406 254 0 9
30,995 gene 28,675 692 0 18
30,995 gene 29,377 1,346 0 34
EF424619 30,995 gene 195 13,151 0 325
30,995 gene 13,325 8,153 0 207
30,995 gene 21,488 836 0 16
30,995 gene 22,336 1,274 0 31
30,995 gene 23,625 4,091 0 107
30,995 gene 27,706 89 0 2
30,995 gene 27,873 137 0 1
30,995 gene 28,090 329 0 7
30,995 gene 28,406 254 0 9
30,995 gene 28,675 692 0 18
30,995 gene 29,377 1,346 0 33
EF424620 30,964 gene 195 13,151 0 332
30,964 gene 13,325 8,153 0 209
30,964 gene 21,488 836 0 19
30,964 gene 22,336 1,274 0 34
30,964 gene 23,625 4,091 0 113
30,964 gene 27,706 89 0 2
30,964 gene 27,873 137 0 2
30,964 gene 28,090 329 0 7
30,964 gene 28,406 254 0 9
30,964 gene 28,675 692 0 18
30,964 gene 29,377 1,346 0 33
NC_003045 31,028 gene 211 21,283 0 541
31,028 gene 21,504 836 0 19
31,028 gene 22,352 1,274 0 31
31,028 gene 23,641 4,091 0 110
31,028 gene 27,722 89 0 2
31,028 gene 27,889 137 0 1
31,028 gene 28,106 329 0 7
31,028 gene 28,422 254 0 9
31,028 gene 28,691 692 0 18
31,028 gene 29,393 1,346 0 34
31,028 mat_peptide 211 737 0 17
31,028 mat_peptide 949 1,814 0 44
31,028 mat_peptide 2,764 5,696 0 160
31,028 mat_peptide 8,461 1,487 0 38
31,028 mat_peptide 9,949 908 0 20
31,028 mat_peptide 10,858 860 0 25
31,028 mat_peptide 11,719 266 0 10
31,028 mat_peptide 11,986 590 0 14
31,028 mat_peptide 12,577 329 0 7
31,028 mat_peptide 12,907 410 0 15
31,028 mat_peptide 16,101 1,808 0 38
31,028 mat_peptide 17,910 1,562 0 39
31,028 mat_peptide 19,473 1,121 0 25
31,028 mat_peptide 20,595 896 0 21
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 7
BCU00735 31,032 gene 22,337 1,289 0 19
31,032 gene 23,641 4,091 0 106
31,032 gene 28,426 254 0 10
31,032 gene 28,695 692 0 17
31,032 gene 29,397 1,346 0 38
31,032 mat_peptide 22,406 1,217 0 32
31,032 mat_peptide 23,692 4,037 0 84
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 4
KX982264 30,847 gene 146 21,274 0 547
30,847 gene 146 13,142 0 338
30,847 gene 21,430 836 0 21
30,847 gene 22,278 1,274 0 28
30,847 gene 23,567 4,091 0 111
30,847 gene 28,346 254 0 9
30,847 gene 28,615 692 0 19
30,847 gene 29,317 1,346 0 33
MG757138 31,026 gene 208 21,283 0 538
31,026 gene 208 13,151 0 330
31,026 gene 21,501 836 0 22
31,026 gene 22,349 1,274 0 29
31,026 gene 23,638 4,091 0 109
31,026 gene 27,719 131 0 4
31,026 gene 27,886 134 0 3
31,026 gene 28,104 329 0 8
31,026 gene 28,420 254 0 9
31,026 gene 28,689 692 0 20
31,026 gene 29,391 1,346 0 33
MG757139 31,028 gene 197 21,283 0 543
31,028 gene 197 13,151 0 332
31,028 gene 21,490 836 0 21
31,028 gene 22,338 1,274 0 30
31,028 gene 23,627 4,094 0 106
31,028 gene 27,711 131 0 4
31,028 gene 27,878 131 0 2
31,028 gene 28,090 329 0 7
31,028 gene 28,406 254 0 9
31,028 gene 28,675 692 0 20
31,028 gene 29,377 1,346 0 34
MG757140 31,024 gene 209 21,283 0 543
31,024 gene 209 13,151 0 332
31,024 gene 21,502 836 0 21
31,024 gene 22,350 1,271 0 31
31,024 gene 23,636 4,094 0 106
31,024 gene 27,720 131 0 4
31,024 gene 27,887 131 0 2
31,024 gene 28,102 329 0 7
31,024 gene 28,418 254 0 9
31,024 gene 28,687 692 0 20
31,024 gene 29,389 1,346 0 33
MG757141 31,019 gene 194 21,283 0 542
31,019 gene 194 13,151 0 331
31,019 gene 21,487 836 0 21
31,019 gene 22,335 1,274 0 30
31,019 gene 23,624 4,094 0 106
31,019 gene 27,708 131 0 4
31,019 gene 27,875 131 0 2
31,019 gene 28,090 329 0 7
31,019 gene 28,406 254 0 9
31,019 gene 28,675 692 0 20
31,019 gene 29,377 1,346 0 33
MG757142 30,939 gene 108 21,283 0 543
30,939 gene 108 13,151 0 331
30,939 gene 21,401 836 0 21
30,939 gene 22,249 1,271 0 31
30,939 gene 23,535 4,094 0 106
30,939 gene 27,619 131 0 4
30,939 gene 27,786 131 0 2
30,939 gene 28,001 329 0 7
30,939 gene 28,317 254 0 9
30,939 gene 28,586 692 0 20
30,939 gene 29,288 1,346 0 33
MH043952 31,019 gene 22,352 1,274 0 31
31,019 gene 23,641 4,091 0 111
31,019 gene 28,413 254 0 9
31,019 gene 28,682 692 0 19
31,019 gene 29,384 1,346 0 35
31,019 5_UTR 1 209 0 6
31,019 3_UTR 30,728 291 0 5
MH043953 31,032 gene 22,352 1,274 0 29
31,032 gene 23,641 4,091 0 115
31,032 gene 28,432 248 0 6
31,032 gene 28,695 692 0 18
31,032 gene 29,397 1,346 0 34
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 4
MH043954 31,016 gene 22,352 1,274 0 32
31,016 gene 23,641 4,091 0 112
31,016 gene 28,410 254 0 9
31,016 gene 28,679 692 0 18
31,016 gene 29,381 1,346 0 35
31,016 5_UTR 1 209 0 6
31,016 3_UTR 30,725 291 0 4
MH043955 31,032 gene 22,352 1,274 0 32
31,032 gene 23,641 4,091 0 111
31,032 gene 28,426 254 0 9
31,032 gene 28,695 692 0 17
31,032 gene 29,397 1,346 0 34
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 3


The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

Coronaviridae (Bovine) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Han_2018_ERR1398089; 368,996 bases)
Corona
Virus Id		 Virus
Length		 Part
Type		 Part
Pos		 Part
Length		 Part
Match		 Segment
Matches
AF220295 31,100 gene 21,521 833 0 34
31,100 gene 22,366 1,274 0 51
31,100 gene 23,655 4,091 0 169
31,100 gene 28,438 254 0 13
31,100 gene 28,707 692 0 17
31,100 gene 29,409 1,346 0 42
AF391541 31,028 gene 21,504 836 0 40
31,028 gene 22,352 1,274 0 49
31,028 gene 23,641 4,091 0 164
31,028 gene 28,422 254 0 14
31,028 gene 28,691 692 0 19
31,028 gene 29,393 1,346 0 42
31,028 5_UTR 1 209 0 5
31,028 3_UTR 30,740 288 0 9
AF391542 31,028 gene 21,504 836 0 41
31,028 gene 22,352 1,274 0 51
31,028 gene 23,641 4,091 0 167
31,028 gene 28,422 254 0 14
31,028 gene 28,691 692 0 21
31,028 gene 29,393 1,346 0 42
31,028 5_UTR 1 209 0 5
31,028 3_UTR 30,740 288 0 9
DQ915164 31,076 gene 21,504 836 0 41
31,076 gene 22,352 1,274 0 48
31,076 gene 23,641 4,091 0 163
31,076 gene 28,106 329 0 14
31,076 gene 28,660 722 0 21
31,076 gene 29,392 1,346 0 41
31,076 5_UTR 1 209 0 5
31,076 3_UTR 30,994 82 0 7
EF424615 31,017 gene 211 13,151 0 537
31,017 gene 13,341 8,153 0 319
31,017 gene 21,504 836 0 42
31,017 gene 22,352 1,274 0 51
31,017 gene 23,641 4,091 0 166
31,017 gene 27,722 89 0 6
31,017 gene 27,889 137 0 3
31,017 gene 28,106 329 0 13
31,017 gene 28,422 254 0 14
31,017 gene 28,691 692 0 19
31,017 gene 29,393 1,346 0 41
EF424616 30,970 gene 195 13,151 0 540
30,970 gene 13,325 8,153 0 320
30,970 gene 21,488 836 0 41
30,970 gene 22,336 1,274 0 49
30,970 gene 23,625 4,091 0 164
30,970 gene 27,706 89 0 5
30,970 gene 27,873 137 0 5
30,970 gene 28,090 329 0 14
30,970 gene 28,406 254 0 14
30,970 gene 28,675 692 0 20
30,970 gene 29,377 1,346 0 41
EF424617 31,016 gene 195 13,151 0 536
31,016 gene 13,325 8,153 0 322
31,016 gene 21,488 836 0 41
31,016 gene 22,336 1,274 0 48
31,016 gene 23,625 4,091 0 163
31,016 gene 27,706 89 0 5
31,016 gene 27,873 137 0 5
31,016 gene 28,090 329 0 14
31,016 gene 28,406 254 0 14
31,016 gene 28,675 692 0 21
31,016 gene 29,377 1,346 0 40
EF424618 30,995 gene 195 13,151 0 536
30,995 gene 13,325 8,153 0 322
30,995 gene 21,488 836 0 41
30,995 gene 22,336 1,274 0 48
30,995 gene 23,625 4,091 0 163
30,995 gene 27,706 89 0 5
30,995 gene 27,873 137 0 5
30,995 gene 28,090 329 0 14
30,995 gene 28,406 254 0 14
30,995 gene 28,675 692 0 21
30,995 gene 29,377 1,346 0 40
EF424619 30,995 gene 195 13,151 0 529
30,995 gene 13,325 8,153 0 313
30,995 gene 21,488 836 0 39
30,995 gene 22,336 1,274 0 49
30,995 gene 23,625 4,091 0 156
30,995 gene 27,706 89 0 5
30,995 gene 27,873 137 0 3
30,995 gene 28,090 329 0 14
30,995 gene 28,406 254 0 14
30,995 gene 28,675 692 0 19
30,995 gene 29,377 1,346 0 41
EF424620 30,964 gene 195 13,151 0 539
30,964 gene 13,325 8,153 0 320
30,964 gene 21,488 836 0 41
30,964 gene 22,336 1,274 0 51
30,964 gene 23,625 4,091 0 170
30,964 gene 27,706 89 0 6
30,964 gene 27,873 137 0 5
30,964 gene 28,090 329 0 14
30,964 gene 28,406 254 0 14
30,964 gene 28,675 692 0 20
30,964 gene 29,377 1,346 0 41
NC_003045 31,028 gene 211 21,283 0 870
31,028 gene 21,504 836 0 40
31,028 gene 22,352 1,274 0 49
31,028 gene 23,641 4,091 0 164
31,028 gene 27,722 89 0 6
31,028 gene 27,889 137 0 2
31,028 gene 28,106 329 0 14
31,028 gene 28,422 254 0 14
31,028 gene 28,691 692 0 19
31,028 gene 29,393 1,346 0 42
31,028 mat_peptide 211 737 0 27
31,028 mat_peptide 949 1,814 0 75
31,028 mat_peptide 2,764 5,696 0 238
31,028 mat_peptide 8,461 1,487 0 62
31,028 mat_peptide 9,949 908 0 34
31,028 mat_peptide 10,858 860 0 36
31,028 mat_peptide 11,719 266 0 9
31,028 mat_peptide 11,986 590 0 21
31,028 mat_peptide 12,577 329 0 19
31,028 mat_peptide 12,907 410 0 15
31,028 mat_peptide 16,101 1,808 0 77
31,028 mat_peptide 17,910 1,562 0 65
31,028 mat_peptide 19,473 1,121 0 49
31,028 mat_peptide 20,595 896 0 40
31,028 5_UTR 1 209 0 5
31,028 3_UTR 30,740 288 0 9
BCU00735 31,032 gene 22,337 1,289 0 56
31,032 gene 23,641 4,091 0 170
31,032 gene 28,426 254 0 13
31,032 gene 28,695 692 0 17
31,032 gene 29,397 1,346 0 42
31,032 mat_peptide 22,406 1,217 0 48
31,032 mat_peptide 23,692 4,037 0 163
31,032 5_UTR 1 209 0 5
31,032 3_UTR 30,741 291 0 11
KX982264 30,847 gene 146 21,274 0 866
30,847 gene 146 13,142 0 546
30,847 gene 21,430 836 0 40
30,847 gene 22,278 1,274 0 46
30,847 gene 23,567 4,091 0 167
30,847 gene 28,346 254 0 14
30,847 gene 28,615 692 0 19
30,847 gene 29,317 1,346 0 42
MG757138 31,026 gene 208 21,283 0 854
31,026 gene 208 13,151 0 542
31,026 gene 21,501 836 0 41
31,026 gene 22,349 1,274 0 47
31,026 gene 23,638 4,091 0 173
31,026 gene 27,719 131 0 4
31,026 gene 27,886 134 0 4
31,026 gene 28,104 329 0 15
31,026 gene 28,420 254 0 14
31,026 gene 28,689 692 0 19
31,026 gene 29,391 1,346 0 41
MG757139 31,028 gene 197 21,283 0 853
31,028 gene 197 13,151 0 541
31,028 gene 21,490 836 0 40
31,028 gene 22,338 1,274 0 47
31,028 gene 23,627 4,094 0 163
31,028 gene 27,711 131 0 4
31,028 gene 27,878 131 0 5
31,028 gene 28,090 329 0 16
31,028 gene 28,406 254 0 14
31,028 gene 28,675 692 0 19
31,028 gene 29,377 1,346 0 41
MG757140 31,024 gene 209 21,283 0 853
31,024 gene 209 13,151 0 541
31,024 gene 21,502 836 0 40
31,024 gene 22,350 1,271 0 52
31,024 gene 23,636 4,094 0 163
31,024 gene 27,720 131 0 4
31,024 gene 27,887 131 0 5
31,024 gene 28,102 329 0 16
31,024 gene 28,418 254 0 14
31,024 gene 28,687 692 0 19
31,024 gene 29,389 1,346 0 42
MG757141 31,019 gene 194 21,283 0 854
31,019 gene 194 13,151 0 542
31,019 gene 21,487 836 0 40
31,019 gene 22,335 1,274 0 47
31,019 gene 23,624 4,094 0 163
31,019 gene 27,708 131 0 4
31,019 gene 27,875 131 0 5
31,019 gene 28,090 329 0 16
31,019 gene 28,406 254 0 14
31,019 gene 28,675 692 0 19
31,019 gene 29,377 1,346 0 42
MG757142 30,939 gene 108 21,283 0 854
30,939 gene 108 13,151 0 541
30,939 gene 21,401 836 0 41
30,939 gene 22,249 1,271 0 52
30,939 gene 23,535 4,094 0 163
30,939 gene 27,619 131 0 4
30,939 gene 27,786 131 0 5
30,939 gene 28,001 329 0 16
30,939 gene 28,317 254 0 14
30,939 gene 28,586 692 0 19
30,939 gene 29,288 1,346 0 42
MH043952 31,019 gene 22,352 1,274 0 52
31,019 gene 23,641 4,091 0 168
31,019 gene 28,413 254 0 14
31,019 gene 28,682 692 0 21
31,019 gene 29,384 1,346 0 40
31,019 5_UTR 1 209 0 4
31,019 3_UTR 30,728 291 0 13
MH043953 31,032 gene 22,352 1,274 0 49
31,032 gene 23,641 4,091 0 168
31,032 gene 28,432 248 0 11
31,032 gene 28,695 692 0 20
31,032 gene 29,397 1,346 0 41
31,032 5_UTR 1 209 0 4
31,032 3_UTR 30,741 291 0 12
MH043954 31,016 gene 22,352 1,274 0 51
31,016 gene 23,641 4,091 0 171
31,016 gene 28,410 254 0 14
31,016 gene 28,679 692 0 20
31,016 gene 29,381 1,346 0 41
31,016 5_UTR 1 209 0 4
31,016 3_UTR 30,725 291 0 12
MH043955 31,032 gene 22,352 1,274 0 51
31,032 gene 23,641 4,091 0 169
31,032 gene 28,426 254 0 14
31,032 gene 28,695 692 0 20
31,032 gene 29,397 1,346 0 41
31,032 5_UTR 1 209 0 4
31,032 3_UTR 30,741 291 0 11


The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

Coronaviridae (Bovine) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Ma_2019_SRR413588; 279,968 bases)
Corona
Virus Id		 Virus
Length		 Part
Type		 Part
Pos		 Part
Length		 Part
Match		 Segment
Matches
AF220295 31,100 gene 21,521 833 0 27
31,100 gene 22,366 1,274 0 33
31,100 gene 23,655 4,091 0 100
31,100 gene 28,438 254 0 7
31,100 gene 28,707 692 0 17
31,100 gene 29,409 1,346 0 37
AF391541 31,028 gene 21,504 836 0 28
31,028 gene 22,352 1,274 0 32
31,028 gene 23,641 4,091 0 102
31,028 gene 28,422 254 0 7
31,028 gene 28,691 692 0 17
31,028 gene 29,393 1,346 0 38
31,028 5_UTR 1 209 0 2
31,028 3_UTR 30,740 288 0 9
AF391542 31,028 gene 21,504 836 0 28
31,028 gene 22,352 1,274 0 32
31,028 gene 23,641 4,091 0 106
31,028 gene 28,422 254 0 8
31,028 gene 28,691 692 0 17
31,028 gene 29,393 1,346 0 39
31,028 5_UTR 1 209 0 2
31,028 3_UTR 30,740 288 0 9
DQ915164 31,076 gene 21,504 836 0 30
31,076 gene 22,352 1,274 0 32
31,076 gene 23,641 4,091 0 104
31,076 gene 28,106 329 0 8
31,076 gene 28,660 722 0 17
31,076 gene 29,392 1,346 0 40
31,076 5_UTR 1 209 0 2
31,076 3_UTR 30,994 82 0 2
EF424615 31,017 gene 211 13,151 0 389
31,017 gene 13,341 8,153 0 207
31,017 gene 21,504 836 0 30
31,017 gene 22,352 1,274 0 30
31,017 gene 23,641 4,091 0 105
31,017 gene 27,722 89 0 3
31,017 gene 27,889 137 0 4
31,017 gene 28,106 329 0 7
31,017 gene 28,422 254 0 7
31,017 gene 28,691 692 0 17
31,017 gene 29,393 1,346 0 40
EF424616 30,970 gene 195 13,151 0 389
30,970 gene 13,325 8,153 0 211
30,970 gene 21,488 836 0 29
30,970 gene 22,336 1,274 0 32
30,970 gene 23,625 4,091 0 104
30,970 gene 27,706 89 0 4
30,970 gene 27,873 137 0 4
30,970 gene 28,090 329 0 7
30,970 gene 28,406 254 0 7
30,970 gene 28,675 692 0 17
30,970 gene 29,377 1,346 0 40
EF424617 31,016 gene 195 13,151 0 385
31,016 gene 13,325 8,153 0 210
31,016 gene 21,488 836 0 29
31,016 gene 22,336 1,274 0 32
31,016 gene 23,625 4,091 0 104
31,016 gene 27,706 89 0 4
31,016 gene 27,873 137 0 4
31,016 gene 28,090 329 0 7
31,016 gene 28,406 254 0 7
31,016 gene 28,675 692 0 16
31,016 gene 29,377 1,346 0 41
EF424618 30,995 gene 195 13,151 0 386
30,995 gene 13,325 8,153 0 210
30,995 gene 21,488 836 0 29
30,995 gene 22,336 1,274 0 32
30,995 gene 23,625 4,091 0 104
30,995 gene 27,706 89 0 4
30,995 gene 27,873 137 0 4
30,995 gene 28,090 329 0 7
30,995 gene 28,406 254 0 7
30,995 gene 28,675 692 0 16
30,995 gene 29,377 1,346 0 41
EF424619 30,995 gene 195 13,151 0 379
30,995 gene 13,325 8,153 0 203
30,995 gene 21,488 836 0 27
30,995 gene 22,336 1,274 0 31
30,995 gene 23,625 4,091 0 99
30,995 gene 27,706 89 0 2
30,995 gene 27,873 137 0 4
30,995 gene 28,090 329 0 7
30,995 gene 28,406 254 0 7
30,995 gene 28,675 692 0 16
30,995 gene 29,377 1,346 0 38
EF424620 30,964 gene 195 13,151 0 390
30,964 gene 13,325 8,153 0 210
30,964 gene 21,488 836 0 29
30,964 gene 22,336 1,274 0 32
30,964 gene 23,625 4,091 0 104
30,964 gene 27,706 89 0 3
30,964 gene 27,873 137 0 3
30,964 gene 28,090 329 0 7
30,964 gene 28,406 254 0 7
30,964 gene 28,675 692 0 17
30,964 gene 29,377 1,346 0 40
NC_003045 31,028 gene 211 21,283 0 603
31,028 gene 21,504 836 0 28
31,028 gene 22,352 1,274 0 32
31,028 gene 23,641 4,091 0 102
31,028 gene 27,722 89 0 3
31,028 gene 27,889 137 0 4
31,028 gene 28,106 329 0 7
31,028 gene 28,422 254 0 7
31,028 gene 28,691 692 0 17
31,028 gene 29,393 1,346 0 38
31,028 mat_peptide 211 737 0 25
31,028 mat_peptide 949 1,814 0 43
31,028 mat_peptide 2,764 5,696 0 161
31,028 mat_peptide 8,461 1,487 0 39
31,028 mat_peptide 9,949 908 0 22
31,028 mat_peptide 10,858 860 0 32
31,028 mat_peptide 11,719 266 0 8
31,028 mat_peptide 11,986 590 0 21
31,028 mat_peptide 12,577 329 0 9
31,028 mat_peptide 12,907 410 0 11
31,028 mat_peptide 16,101 1,808 0 48
31,028 mat_peptide 17,910 1,562 0 33
31,028 mat_peptide 19,473 1,121 0 25
31,028 mat_peptide 20,595 896 0 23
31,028 5_UTR 1 209 0 2
31,028 3_UTR 30,740 288 0 9
BCU00735 31,032 gene 22,337 1,289 0 32
31,032 gene 23,641 4,091 0 100
31,032 gene 28,426 254 0 7
31,032 gene 28,695 692 0 17
31,032 gene 29,397 1,346 0 37
31,032 mat_peptide 22,406 1,217 0 38
31,032 mat_peptide 23,692 4,037 0 104
31,032 5_UTR 1 209 0 3
31,032 3_UTR 30,741 291 0 10
KX982264 30,847 gene 146 21,274 0 614
30,847 gene 146 13,142 0 381
30,847 gene 21,430 836 0 28
30,847 gene 22,278 1,274 0 34
30,847 gene 23,567 4,091 0 104
30,847 gene 28,346 254 0 7
30,847 gene 28,615 692 0 18
30,847 gene 29,317 1,346 0 38
MG757138 31,026 gene 208 21,283 0 605
31,026 gene 208 13,151 0 392
31,026 gene 21,501 836 0 29
31,026 gene 22,349 1,274 0 33
31,026 gene 23,638 4,091 0 99
31,026 gene 27,719 131 0 2
31,026 gene 27,886 134 0 1
31,026 gene 28,104 329 0 7
31,026 gene 28,420 254 0 7
31,026 gene 28,689 692 0 18
31,026 gene 29,391 1,346 0 40
MG757139 31,028 gene 197 21,283 0 609
31,028 gene 197 13,151 0 394
31,028 gene 21,490 836 0 29
31,028 gene 22,338 1,274 0 35
31,028 gene 23,627 4,094 0 111
31,028 gene 27,711 131 0 2
31,028 gene 27,878 131 0 1
31,028 gene 28,090 329 0 6
31,028 gene 28,406 254 0 7
31,028 gene 28,675 692 0 18
31,028 gene 29,377 1,346 0 37
MG757140 31,024 gene 209 21,283 0 609
31,024 gene 209 13,151 0 394
31,024 gene 21,502 836 0 29
31,024 gene 22,350 1,271 0 34
31,024 gene 23,636 4,094 0 111
31,024 gene 27,720 131 0 2
31,024 gene 27,887 131 0 1
31,024 gene 28,102 329 0 6
31,024 gene 28,418 254 0 7
31,024 gene 28,687 692 0 18
31,024 gene 29,389 1,346 0 37
MG757141 31,019 gene 194 21,283 0 608
31,019 gene 194 13,151 0 393
31,019 gene 21,487 836 0 29
31,019 gene 22,335 1,274 0 35
31,019 gene 23,624 4,094 0 111
31,019 gene 27,708 131 0 2
31,019 gene 27,875 131 0 1
31,019 gene 28,090 329 0 6
31,019 gene 28,406 254 0 7
31,019 gene 28,675 692 0 18
31,019 gene 29,377 1,346 0 37
MG757142 30,939 gene 108 21,283 0 607
30,939 gene 108 13,151 0 392
30,939 gene 21,401 836 0 28
30,939 gene 22,249 1,271 0 34
30,939 gene 23,535 4,094 0 111
30,939 gene 27,619 131 0 2
30,939 gene 27,786 131 0 1
30,939 gene 28,001 329 0 6
30,939 gene 28,317 254 0 7
30,939 gene 28,586 692 0 18
30,939 gene 29,288 1,346 0 37
MH043952 31,019 gene 22,352 1,274 0 34
31,019 gene 23,641 4,091 0 106
31,019 gene 28,413 254 0 7
31,019 gene 28,682 692 0 16
31,019 gene 29,384 1,346 0 41
31,019 5_UTR 1 209 0 1
31,019 3_UTR 30,728 291 0 9
MH043953 31,032 gene 22,352 1,274 0 33
31,032 gene 23,641 4,091 0 102
31,032 gene 28,432 248 0 7
31,032 gene 28,695 692 0 16
31,032 gene 29,397 1,346 0 39
31,032 5_UTR 1 209 0 1
31,032 3_UTR 30,741 291 0 11
MH043954 31,016 gene 22,352 1,274 0 33
31,016 gene 23,641 4,091 0 107
31,016 gene 28,410 254 0 7
31,016 gene 28,679 692 0 15
31,016 gene 29,381 1,346 0 40
31,016 5_UTR 1 209 0 1
31,016 3_UTR 30,725 291 0 9
MH043955 31,032 gene 22,352 1,274 0 33
31,032 gene 23,641 4,091 0 105
31,032 gene 28,426 254 0 7
31,032 gene 28,695 692 0 15
31,032 gene 29,397 1,346 0 39
31,032 5_UTR 1 209 0 1
31,032 3_UTR 30,741 291 0 9


The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

Coronaviridae (Bovine) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Ma_2019_SRR413675; 392,017 bases)
Corona
Virus Id		 Virus
Length		 Part
Type		 Part
Pos		 Part
Length		 Part
Match		 Segment
Matches
AF220295 31,100 gene 21,521 833 0 35
31,100 gene 22,366 1,274 0 55
31,100 gene 23,655 4,091 0 178
31,100 gene 28,438 254 0 12
31,100 gene 28,707 692 0 29
31,100 gene 29,409 1,346 0 36
AF391541 31,028 gene 21,504 836 0 31
31,028 gene 22,352 1,274 0 58
31,028 gene 23,641 4,091 0 177
31,028 gene 28,422 254 0 13
31,028 gene 28,691 692 0 29
31,028 gene 29,393 1,346 0 36
31,028 5_UTR 1 209 0 8
31,028 3_UTR 30,740 288 0 11
AF391542 31,028 gene 21,504 836 0 32
31,028 gene 22,352 1,274 0 57
31,028 gene 23,641 4,091 0 175
31,028 gene 28,422 254 0 13
31,028 gene 28,691 692 0 31
31,028 gene 29,393 1,346 0 36
31,028 5_UTR 1 209 0 8
31,028 3_UTR 30,740 288 0 11
DQ915164 31,076 gene 21,504 836 0 32
31,076 gene 22,352 1,274 0 57
31,076 gene 23,641 4,091 0 177
31,076 gene 28,106 329 0 13
31,076 gene 28,660 722 0 32
31,076 gene 29,392 1,346 0 36
31,076 5_UTR 1 209 0 8
31,076 3_UTR 30,994 82 0 6
EF424615 31,017 gene 211 13,151 0 576
31,017 gene 13,341 8,153 0 358
31,017 gene 21,504 836 0 33
31,017 gene 22,352 1,274 0 56
31,017 gene 23,641 4,091 0 179
31,017 gene 27,722 89 0 2
31,017 gene 27,889 137 0 4
31,017 gene 28,106 329 0 13
31,017 gene 28,422 254 0 13
31,017 gene 28,691 692 0 31
31,017 gene 29,393 1,346 0 36
EF424616 30,970 gene 195 13,151 0 577
30,970 gene 13,325 8,153 0 355
30,970 gene 21,488 836 0 32
30,970 gene 22,336 1,274 0 58
30,970 gene 23,625 4,091 0 173
30,970 gene 27,706 89 0 1
30,970 gene 27,873 137 0 4
30,970 gene 28,090 329 0 13
30,970 gene 28,406 254 0 13
30,970 gene 28,675 692 0 30
30,970 gene 29,377 1,346 0 36
EF424617 31,016 gene 195 13,151 0 573
31,016 gene 13,325 8,153 0 355
31,016 gene 21,488 836 0 32
31,016 gene 22,336 1,274 0 59
31,016 gene 23,625 4,091 0 172
31,016 gene 27,706 89 0 1
31,016 gene 27,873 137 0 4
31,016 gene 28,090 329 0 13
31,016 gene 28,406 254 0 13
31,016 gene 28,675 692 0 29
31,016 gene 29,377 1,346 0 36
EF424618 30,995 gene 195 13,151 0 573
30,995 gene 13,325 8,153 0 355
30,995 gene 21,488 836 0 32
30,995 gene 22,336 1,274 0 59
30,995 gene 23,625 4,091 0 172
30,995 gene 27,706 89 0 1
30,995 gene 27,873 137 0 4
30,995 gene 28,090 329 0 13
30,995 gene 28,406 254 0 13
30,995 gene 28,675 692 0 29
30,995 gene 29,377 1,346 0 36
EF424619 30,995 gene 195 13,151 0 565
30,995 gene 13,325 8,153 0 349
30,995 gene 21,488 836 0 28
30,995 gene 22,336 1,274 0 57
30,995 gene 23,625 4,091 0 167
30,995 gene 27,706 89 0 1
30,995 gene 27,873 137 0 4
30,995 gene 28,090 329 0 13
30,995 gene 28,406 254 0 13
30,995 gene 28,675 692 0 30
30,995 gene 29,377 1,346 0 36
EF424620 30,964 gene 195 13,151 0 577
30,964 gene 13,325 8,153 0 353
30,964 gene 21,488 836 0 32
30,964 gene 22,336 1,274 0 56
30,964 gene 23,625 4,091 0 180
30,964 gene 27,706 89 0 2
30,964 gene 27,873 137 0 5
30,964 gene 28,090 329 0 13
30,964 gene 28,406 254 0 13
30,964 gene 28,675 692 0 30
30,964 gene 29,377 1,346 0 37
NC_003045 31,028 gene 211 21,283 0 928
31,028 gene 21,504 836 0 31
31,028 gene 22,352 1,274 0 58
31,028 gene 23,641 4,091 0 177
31,028 gene 27,722 89 0 2
31,028 gene 27,889 137 0 3
31,028 gene 28,106 329 0 13
31,028 gene 28,422 254 0 13
31,028 gene 28,691 692 0 29
31,028 gene 29,393 1,346 0 36
31,028 mat_peptide 211 737 0 17
31,028 mat_peptide 949 1,814 0 92
31,028 mat_peptide 2,764 5,696 0 260
31,028 mat_peptide 8,461 1,487 0 69
31,028 mat_peptide 9,949 908 0 42
31,028 mat_peptide 10,858 860 0 44
31,028 mat_peptide 11,719 266 0 13
31,028 mat_peptide 11,986 590 0 27
31,028 mat_peptide 12,577 329 0 18
31,028 mat_peptide 12,907 410 0 18
31,028 mat_peptide 16,101 1,808 0 71
31,028 mat_peptide 17,910 1,562 0 61
31,028 mat_peptide 19,473 1,121 0 49
31,028 mat_peptide 20,595 896 0 40
31,028 5_UTR 1 209 0 8
31,028 3_UTR 30,740 288 0 11
BCU00735 31,032 gene 22,337 1,289 0 52
31,032 gene 23,641 4,091 0 176
31,032 gene 28,426 254 0 12
31,032 gene 28,695 692 0 29
31,032 gene 29,397 1,346 0 36
31,032 mat_peptide 22,406 1,217 0 55
31,032 mat_peptide 23,692 4,037 0 180
31,032 5_UTR 1 209 0 8
31,032 3_UTR 30,741 291 0 9
KX982264 30,847 gene 146 21,274 0 922
30,847 gene 146 13,142 0 570
30,847 gene 21,430 836 0 32
30,847 gene 22,278 1,274 0 58
30,847 gene 23,567 4,091 0 176
30,847 gene 28,346 254 0 13
30,847 gene 28,615 692 0 32
30,847 gene 29,317 1,346 0 37
MG757138 31,026 gene 208 21,283 0 909
31,026 gene 208 13,151 0 562
31,026 gene 21,501 836 0 31
31,026 gene 22,349 1,274 0 57
31,026 gene 23,638 4,091 0 176
31,026 gene 27,719 131 0 3
31,026 gene 27,886 134 0 7
31,026 gene 28,104 329 0 11
31,026 gene 28,420 254 0 13
31,026 gene 28,689 692 0 32
31,026 gene 29,391 1,346 0 38
MG757139 31,028 gene 197 21,283 0 908
31,028 gene 197 13,151 0 561
31,028 gene 21,490 836 0 32
31,028 gene 22,338 1,274 0 58
31,028 gene 23,627 4,094 0 184
31,028 gene 27,711 131 0 3
31,028 gene 27,878 131 0 6
31,028 gene 28,090 329 0 12
31,028 gene 28,406 254 0 13
31,028 gene 28,675 692 0 32
31,028 gene 29,377 1,346 0 36
MG757140 31,024 gene 209 21,283 0 908
31,024 gene 209 13,151 0 561
31,024 gene 21,502 836 0 32
31,024 gene 22,350 1,271 0 56
31,024 gene 23,636 4,094 0 184
31,024 gene 27,720 131 0 3
31,024 gene 27,887 131 0 6
31,024 gene 28,102 329 0 12
31,024 gene 28,418 254 0 13
31,024 gene 28,687 692 0 32
31,024 gene 29,389 1,346 0 36
MG757141 31,019 gene 194 21,283 0 908
31,019 gene 194 13,151 0 561
31,019 gene 21,487 836 0 32
31,019 gene 22,335 1,274 0 58
31,019 gene 23,624 4,094 0 184
31,019 gene 27,708 131 0 3
31,019 gene 27,875 131 0 6
31,019 gene 28,090 329 0 12
31,019 gene 28,406 254 0 13
31,019 gene 28,675 692 0 32
31,019 gene 29,377 1,346 0 36
MG757142 30,939 gene 108 21,283 0 906
30,939 gene 108 13,151 0 559
30,939 gene 21,401 836 0 32
30,939 gene 22,249 1,271 0 56
30,939 gene 23,535 4,094 0 184
30,939 gene 27,619 131 0 3
30,939 gene 27,786 131 0 6
30,939 gene 28,001 329 0 12
30,939 gene 28,317 254 0 13
30,939 gene 28,586 692 0 32
30,939 gene 29,288 1,346 0 36
MH043952 31,019 gene 22,352 1,274 0 55
31,019 gene 23,641 4,091 0 176
31,019 gene 28,413 254 0 13
31,019 gene 28,682 692 0 31
31,019 gene 29,384 1,346 0 34
31,019 5_UTR 1 209 0 8
31,019 3_UTR 30,728 291 0 10
MH043953 31,032 gene 22,352 1,274 0 56
31,032 gene 23,641 4,091 0 177
31,032 gene 28,432 248 0 11
31,032 gene 28,695 692 0 31
31,032 gene 29,397 1,346 0 36
31,032 5_UTR 1 209 0 8
31,032 3_UTR 30,741 291 0 9
MH043954 31,016 gene 22,352 1,274 0 58
31,016 gene 23,641 4,091 0 179
31,016 gene 28,410 254 0 13
31,016 gene 28,679 692 0 31
31,016 gene 29,381 1,346 0 36
31,016 5_UTR 1 209 0 8
31,016 3_UTR 30,725 291 0 10
MH043955 31,032 gene 22,352 1,274 0 58
31,032 gene 23,641 4,091 0 181
31,032 gene 28,426 254 0 13
31,032 gene 28,695 692 0 30
31,032 gene 29,397 1,346 0 35
31,032 5_UTR 1 209 0 8
31,032 3_UTR 30,741 291 0 9


The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

Coronaviridae (Bovine) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Shkoporov_2019_SRR9161502; 293,130 bases)
Corona
Virus Id		 Virus
Length		 Part
Type		 Part
Pos		 Part
Length		 Part
Match		 Segment
Matches
AF220295 31,100 gene 21,521 833 0 33
31,100 gene 22,366 1,274 0 51
31,100 gene 23,655 4,091 0 163
31,100 gene 28,438 254 0 9
31,100 gene 28,707 692 0 20
31,100 gene 29,409 1,346 0 36
AF391541 31,028 gene 21,504 836 0 38
31,028 gene 22,352 1,274 0 55
31,028 gene 23,641 4,091 0 163
31,028 gene 28,422 254 0 10
31,028 gene 28,691 692 0 21
31,028 gene 29,393 1,346 0 33
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 8
AF391542 31,028 gene 21,504 836 0 37
31,028 gene 22,352 1,274 0 56
31,028 gene 23,641 4,091 0 166
31,028 gene 28,422 254 0 10
31,028 gene 28,691 692 0 21
31,028 gene 29,393 1,346 0 33
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 8
DQ915164 31,076 gene 21,504 836 0 39
31,076 gene 22,352 1,274 0 54
31,076 gene 23,641 4,091 0 164
31,076 gene 28,106 329 0 13
31,076 gene 28,660 722 0 22
31,076 gene 29,392 1,346 0 33
31,076 5_UTR 1 209 0 6
31,076 3_UTR 30,994 82 0 2
EF424615 31,017 gene 211 13,151 0 503
31,017 gene 13,341 8,153 0 304
31,017 gene 21,504 836 0 40
31,017 gene 22,352 1,274 0 55
31,017 gene 23,641 4,091 0 169
31,017 gene 27,722 89 0 3
31,017 gene 27,889 137 0 4
31,017 gene 28,106 329 0 13
31,017 gene 28,422 254 0 10
31,017 gene 28,691 692 0 23
31,017 gene 29,393 1,346 0 34
EF424616 30,970 gene 195 13,151 0 506
30,970 gene 13,325 8,153 0 298
30,970 gene 21,488 836 0 39
30,970 gene 22,336 1,274 0 56
30,970 gene 23,625 4,091 0 164
30,970 gene 27,706 89 0 4
30,970 gene 27,873 137 0 5
30,970 gene 28,090 329 0 13
30,970 gene 28,406 254 0 10
30,970 gene 28,675 692 0 21
30,970 gene 29,377 1,346 0 33
EF424617 31,016 gene 195 13,151 0 503
31,016 gene 13,325 8,153 0 301
31,016 gene 21,488 836 0 39
31,016 gene 22,336 1,274 0 55
31,016 gene 23,625 4,091 0 163
31,016 gene 27,706 89 0 4
31,016 gene 27,873 137 0 5
31,016 gene 28,090 329 0 13
31,016 gene 28,406 254 0 10
31,016 gene 28,675 692 0 21
31,016 gene 29,377 1,346 0 35
EF424618 30,995 gene 195 13,151 0 501
30,995 gene 13,325 8,153 0 301
30,995 gene 21,488 836 0 39
30,995 gene 22,336 1,274 0 55
30,995 gene 23,625 4,091 0 163
30,995 gene 27,706 89 0 4
30,995 gene 27,873 137 0 5
30,995 gene 28,090 329 0 13
30,995 gene 28,406 254 0 10
30,995 gene 28,675 692 0 21
30,995 gene 29,377 1,346 0 35
EF424619 30,995 gene 195 13,151 0 496
30,995 gene 13,325 8,153 0 299
30,995 gene 21,488 836 0 35
30,995 gene 22,336 1,274 0 55
30,995 gene 23,625 4,091 0 158
30,995 gene 27,706 89 0 2
30,995 gene 27,873 137 0 4
30,995 gene 28,090 329 0 13
30,995 gene 28,406 254 0 10
30,995 gene 28,675 692 0 21
30,995 gene 29,377 1,346 0 33
EF424620 30,964 gene 195 13,151 0 501
30,964 gene 13,325 8,153 0 302
30,964 gene 21,488 836 0 39
30,964 gene 22,336 1,274 0 55
30,964 gene 23,625 4,091 0 172
30,964 gene 27,706 89 0 3
30,964 gene 27,873 137 0 5
30,964 gene 28,090 329 0 13
30,964 gene 28,406 254 0 10
30,964 gene 28,675 692 0 21
30,964 gene 29,377 1,346 0 33
NC_003045 31,028 gene 211 21,283 0 803
31,028 gene 21,504 836 0 38
31,028 gene 22,352 1,274 0 55
31,028 gene 23,641 4,091 0 163
31,028 gene 27,722 89 0 3
31,028 gene 27,889 137 0 4
31,028 gene 28,106 329 0 13
31,028 gene 28,422 254 0 10
31,028 gene 28,691 692 0 21
31,028 gene 29,393 1,346 0 33
31,028 mat_peptide 211 737 0 15
31,028 mat_peptide 949 1,814 0 73
31,028 mat_peptide 2,764 5,696 0 230
31,028 mat_peptide 8,461 1,487 0 51
31,028 mat_peptide 9,949 908 0 42
31,028 mat_peptide 10,858 860 0 36
31,028 mat_peptide 11,719 266 0 10
31,028 mat_peptide 11,986 590 0 22
31,028 mat_peptide 12,577 329 0 13
31,028 mat_peptide 12,907 410 0 12
31,028 mat_peptide 16,101 1,808 0 68
31,028 mat_peptide 17,910 1,562 0 55
31,028 mat_peptide 19,473 1,121 0 40
31,028 mat_peptide 20,595 896 0 37
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 8
BCU00735 31,032 gene 22,337 1,289 0 39
31,032 gene 23,641 4,091 0 163
31,032 gene 28,426 254 0 9
31,032 gene 28,695 692 0 20
31,032 gene 29,397 1,346 0 36
31,032 mat_peptide 22,406 1,217 0 43
31,032 mat_peptide 23,692 4,037 0 155
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 9
KX982264 30,847 gene 146 21,274 0 801
30,847 gene 146 13,142 0 484
30,847 gene 21,430 836 0 37
30,847 gene 22,278 1,274 0 54
30,847 gene 23,567 4,091 0 160
30,847 gene 28,346 254 0 10
30,847 gene 28,615 692 0 22
30,847 gene 29,317 1,346 0 32
MG757138 31,026 gene 208 21,283 0 806
31,026 gene 208 13,151 0 502
31,026 gene 21,501 836 0 36
31,026 gene 22,349 1,274 0 51
31,026 gene 23,638 4,091 0 160
31,026 gene 27,719 131 0 6
31,026 gene 27,886 134 0 2
31,026 gene 28,104 329 0 11
31,026 gene 28,420 254 0 10
31,026 gene 28,689 692 0 21
31,026 gene 29,391 1,346 0 34
MG757139 31,028 gene 197 21,283 0 807
31,028 gene 197 13,151 0 502
31,028 gene 21,490 836 0 37
31,028 gene 22,338 1,274 0 53
31,028 gene 23,627 4,094 0 159
31,028 gene 27,711 131 0 6
31,028 gene 27,878 131 0 5
31,028 gene 28,090 329 0 12
31,028 gene 28,406 254 0 10
31,028 gene 28,675 692 0 21
31,028 gene 29,377 1,346 0 32
MG757140 31,024 gene 209 21,283 0 807
31,024 gene 209 13,151 0 502
31,024 gene 21,502 836 0 37
31,024 gene 22,350 1,271 0 47
31,024 gene 23,636 4,094 0 159
31,024 gene 27,720 131 0 6
31,024 gene 27,887 131 0 5
31,024 gene 28,102 329 0 12
31,024 gene 28,418 254 0 10
31,024 gene 28,687 692 0 21
31,024 gene 29,389 1,346 0 33
MG757141 31,019 gene 194 21,283 0 807
31,019 gene 194 13,151 0 502
31,019 gene 21,487 836 0 37
31,019 gene 22,335 1,274 0 53
31,019 gene 23,624 4,094 0 159
31,019 gene 27,708 131 0 6
31,019 gene 27,875 131 0 5
31,019 gene 28,090 329 0 12
31,019 gene 28,406 254 0 10
31,019 gene 28,675 692 0 21
31,019 gene 29,377 1,346 0 33
MG757142 30,939 gene 108 21,283 0 806
30,939 gene 108 13,151 0 500
30,939 gene 21,401 836 0 36
30,939 gene 22,249 1,271 0 47
30,939 gene 23,535 4,094 0 159
30,939 gene 27,619 131 0 6
30,939 gene 27,786 131 0 5
30,939 gene 28,001 329 0 12
30,939 gene 28,317 254 0 10
30,939 gene 28,586 692 0 21
30,939 gene 29,288 1,346 0 33
MH043952 31,019 gene 22,352 1,274 0 55
31,019 gene 23,641 4,091 0 164
31,019 gene 28,413 254 0 10
31,019 gene 28,682 692 0 21
31,019 gene 29,384 1,346 0 34
31,019 5_UTR 1 209 0 6
31,019 3_UTR 30,728 291 0 8
MH043953 31,032 gene 22,352 1,274 0 54
31,032 gene 23,641 4,091 0 164
31,032 gene 28,432 248 0 10
31,032 gene 28,695 692 0 21
31,032 gene 29,397 1,346 0 36
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 8
MH043954 31,016 gene 22,352 1,274 0 55
31,016 gene 23,641 4,091 0 166
31,016 gene 28,410 254 0 10
31,016 gene 28,679 692 0 21
31,016 gene 29,381 1,346 0 34
31,016 5_UTR 1 209 0 6
31,016 3_UTR 30,725 291 0 8
MH043955 31,032 gene 22,352 1,274 0 56
31,032 gene 23,641 4,091 0 166
31,032 gene 28,426 254 0 10
31,032 gene 28,695 692 0 21
31,032 gene 29,397 1,346 0 33
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 9


The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

Coronaviridae (Bovine) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Shkoporov_2019_SRR9161502; 293,130 bases)
Corona
Virus Id		 Virus
Length		 Part
Type		 Part
Pos		 Part
Length		 Part
Match		 Segment
Matches
AF220295 31,100 gene 21,521 833 0 33
31,100 gene 22,366 1,274 0 51
31,100 gene 23,655 4,091 0 163
31,100 gene 28,438 254 0 9
31,100 gene 28,707 692 0 20
31,100 gene 29,409 1,346 0 36
AF391541 31,028 gene 21,504 836 0 38
31,028 gene 22,352 1,274 0 55
31,028 gene 23,641 4,091 0 163
31,028 gene 28,422 254 0 10
31,028 gene 28,691 692 0 21
31,028 gene 29,393 1,346 0 33
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 8
AF391542 31,028 gene 21,504 836 0 37
31,028 gene 22,352 1,274 0 56
31,028 gene 23,641 4,091 0 166
31,028 gene 28,422 254 0 10
31,028 gene 28,691 692 0 21
31,028 gene 29,393 1,346 0 33
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 8
DQ915164 31,076 gene 21,504 836 0 39
31,076 gene 22,352 1,274 0 54
31,076 gene 23,641 4,091 0 164
31,076 gene 28,106 329 0 13
31,076 gene 28,660 722 0 22
31,076 gene 29,392 1,346 0 33
31,076 5_UTR 1 209 0 6
31,076 3_UTR 30,994 82 0 2
EF424615 31,017 gene 211 13,151 0 503
31,017 gene 13,341 8,153 0 304
31,017 gene 21,504 836 0 40
31,017 gene 22,352 1,274 0 55
31,017 gene 23,641 4,091 0 169
31,017 gene 27,722 89 0 3
31,017 gene 27,889 137 0 4
31,017 gene 28,106 329 0 13
31,017 gene 28,422 254 0 10
31,017 gene 28,691 692 0 23
31,017 gene 29,393 1,346 0 34
EF424616 30,970 gene 195 13,151 0 506
30,970 gene 13,325 8,153 0 298
30,970 gene 21,488 836 0 39
30,970 gene 22,336 1,274 0 56
30,970 gene 23,625 4,091 0 164
30,970 gene 27,706 89 0 4
30,970 gene 27,873 137 0 5
30,970 gene 28,090 329 0 13
30,970 gene 28,406 254 0 10
30,970 gene 28,675 692 0 21
30,970 gene 29,377 1,346 0 33
EF424617 31,016 gene 195 13,151 0 503
31,016 gene 13,325 8,153 0 301
31,016 gene 21,488 836 0 39
31,016 gene 22,336 1,274 0 55
31,016 gene 23,625 4,091 0 163
31,016 gene 27,706 89 0 4
31,016 gene 27,873 137 0 5
31,016 gene 28,090 329 0 13
31,016 gene 28,406 254 0 10
31,016 gene 28,675 692 0 21
31,016 gene 29,377 1,346 0 35
EF424618 30,995 gene 195 13,151 0 501
30,995 gene 13,325 8,153 0 301
30,995 gene 21,488 836 0 39
30,995 gene 22,336 1,274 0 55
30,995 gene 23,625 4,091 0 163
30,995 gene 27,706 89 0 4
30,995 gene 27,873 137 0 5
30,995 gene 28,090 329 0 13
30,995 gene 28,406 254 0 10
30,995 gene 28,675 692 0 21
30,995 gene 29,377 1,346 0 35
EF424619 30,995 gene 195 13,151 0 496
30,995 gene 13,325 8,153 0 299
30,995 gene 21,488 836 0 35
30,995 gene 22,336 1,274 0 55
30,995 gene 23,625 4,091 0 158
30,995 gene 27,706 89 0 2
30,995 gene 27,873 137 0 4
30,995 gene 28,090 329 0 13
30,995 gene 28,406 254 0 10
30,995 gene 28,675 692 0 21
30,995 gene 29,377 1,346 0 33
EF424620 30,964 gene 195 13,151 0 501
30,964 gene 13,325 8,153 0 302
30,964 gene 21,488 836 0 39
30,964 gene 22,336 1,274 0 55
30,964 gene 23,625 4,091 0 172
30,964 gene 27,706 89 0 3
30,964 gene 27,873 137 0 5
30,964 gene 28,090 329 0 13
30,964 gene 28,406 254 0 10
30,964 gene 28,675 692 0 21
30,964 gene 29,377 1,346 0 33
NC_003045 31,028 gene 211 21,283 0 803
31,028 gene 21,504 836 0 38
31,028 gene 22,352 1,274 0 55
31,028 gene 23,641 4,091 0 163
31,028 gene 27,722 89 0 3
31,028 gene 27,889 137 0 4
31,028 gene 28,106 329 0 13
31,028 gene 28,422 254 0 10
31,028 gene 28,691 692 0 21
31,028 gene 29,393 1,346 0 33
31,028 mat_peptide 211 737 0 15
31,028 mat_peptide 949 1,814 0 73
31,028 mat_peptide 2,764 5,696 0 230
31,028 mat_peptide 8,461 1,487 0 51
31,028 mat_peptide 9,949 908 0 42
31,028 mat_peptide 10,858 860 0 36
31,028 mat_peptide 11,719 266 0 10
31,028 mat_peptide 11,986 590 0 22
31,028 mat_peptide 12,577 329 0 13
31,028 mat_peptide 12,907 410 0 12
31,028 mat_peptide 16,101 1,808 0 68
31,028 mat_peptide 17,910 1,562 0 55
31,028 mat_peptide 19,473 1,121 0 40
31,028 mat_peptide 20,595 896 0 37
31,028 5_UTR 1 209 0 6
31,028 3_UTR 30,740 288 0 8
BCU00735 31,032 gene 22,337 1,289 0 39
31,032 gene 23,641 4,091 0 163
31,032 gene 28,426 254 0 9
31,032 gene 28,695 692 0 20
31,032 gene 29,397 1,346 0 36
31,032 mat_peptide 22,406 1,217 0 43
31,032 mat_peptide 23,692 4,037 0 155
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 9
KX982264 30,847 gene 146 21,274 0 801
30,847 gene 146 13,142 0 484
30,847 gene 21,430 836 0 37
30,847 gene 22,278 1,274 0 54
30,847 gene 23,567 4,091 0 160
30,847 gene 28,346 254 0 10
30,847 gene 28,615 692 0 22
30,847 gene 29,317 1,346 0 32
MG757138 31,026 gene 208 21,283 0 806
31,026 gene 208 13,151 0 502
31,026 gene 21,501 836 0 36
31,026 gene 22,349 1,274 0 51
31,026 gene 23,638 4,091 0 160
31,026 gene 27,719 131 0 6
31,026 gene 27,886 134 0 2
31,026 gene 28,104 329 0 11
31,026 gene 28,420 254 0 10
31,026 gene 28,689 692 0 21
31,026 gene 29,391 1,346 0 34
MG757139 31,028 gene 197 21,283 0 807
31,028 gene 197 13,151 0 502
31,028 gene 21,490 836 0 37
31,028 gene 22,338 1,274 0 53
31,028 gene 23,627 4,094 0 159
31,028 gene 27,711 131 0 6
31,028 gene 27,878 131 0 5
31,028 gene 28,090 329 0 12
31,028 gene 28,406 254 0 10
31,028 gene 28,675 692 0 21
31,028 gene 29,377 1,346 0 32
MG757140 31,024 gene 209 21,283 0 807
31,024 gene 209 13,151 0 502
31,024 gene 21,502 836 0 37
31,024 gene 22,350 1,271 0 47
31,024 gene 23,636 4,094 0 159
31,024 gene 27,720 131 0 6
31,024 gene 27,887 131 0 5
31,024 gene 28,102 329 0 12
31,024 gene 28,418 254 0 10
31,024 gene 28,687 692 0 21
31,024 gene 29,389 1,346 0 33
MG757141 31,019 gene 194 21,283 0 807
31,019 gene 194 13,151 0 502
31,019 gene 21,487 836 0 37
31,019 gene 22,335 1,274 0 53
31,019 gene 23,624 4,094 0 159
31,019 gene 27,708 131 0 6
31,019 gene 27,875 131 0 5
31,019 gene 28,090 329 0 12
31,019 gene 28,406 254 0 10
31,019 gene 28,675 692 0 21
31,019 gene 29,377 1,346 0 33
MG757142 30,939 gene 108 21,283 0 806
30,939 gene 108 13,151 0 500
30,939 gene 21,401 836 0 36
30,939 gene 22,249 1,271 0 47
30,939 gene 23,535 4,094 0 159
30,939 gene 27,619 131 0 6
30,939 gene 27,786 131 0 5
30,939 gene 28,001 329 0 12
30,939 gene 28,317 254 0 10
30,939 gene 28,586 692 0 21
30,939 gene 29,288 1,346 0 33
MH043952 31,019 gene 22,352 1,274 0 55
31,019 gene 23,641 4,091 0 164
31,019 gene 28,413 254 0 10
31,019 gene 28,682 692 0 21
31,019 gene 29,384 1,346 0 34
31,019 5_UTR 1 209 0 6
31,019 3_UTR 30,728 291 0 8
MH043953 31,032 gene 22,352 1,274 0 54
31,032 gene 23,641 4,091 0 164
31,032 gene 28,432 248 0 10
31,032 gene 28,695 692 0 21
31,032 gene 29,397 1,346 0 36
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 8
MH043954 31,016 gene 22,352 1,274 0 55
31,016 gene 23,641 4,091 0 166
31,016 gene 28,410 254 0 10
31,016 gene 28,679 692 0 21
31,016 gene 29,381 1,346 0 34
31,016 5_UTR 1 209 0 6
31,016 3_UTR 30,725 291 0 8
MH043955 31,032 gene 22,352 1,274 0 56
31,032 gene 23,641 4,091 0 166
31,032 gene 28,426 254 0 10
31,032 gene 28,695 692 0 21
31,032 gene 29,397 1,346 0 33
31,032 5_UTR 1 209 0 6
31,032 3_UTR 30,741 291 0 9


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