GC-8 Appendix LOW

This is an appendix to: On The Origin Of A Genetic Constant - 8

---

GenBank Genome Files
Low Variations
Analysis Report

after processing 100,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 1
(v= <1 [0.0210%])

---

URL Link: LR862133.1

Genome info for LR862133.1:

LR862133 18411140 bp DNA linear PLN 28-JUL-2020 Ananas comosus var. bracteatus genome assembly
chromosome: 5.

Nucleotide count: 18,405,240
Non-Nucleotide Count: 5,900

Atom	Atom Count	Percent
Carbon	88,541,178	32.4808
Hydrogen	97,752,075	35.8597
Nitrogen	67,878,531	24.9008
Oxygen	18,424,038	6.7587
Totals	272,595,822	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 200,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 100001
(v= <1 [0.0793%])

---

URL Link: OD565703.1

Genome info for OD565703.1:

OD565703 160245 bp DNA linear INV 11-DEC-2020 4 Tbi b3v08.

Nucleotide count: 154,008
Non-Nucleotide Count: 6,237

Atom	Atom Count	Percent
Carbon	743,062	32.5406
Hydrogen	819,390	35.8832
Nitrogen	568,034	24.8757
Oxygen	153,003	6.7004
Totals	2,283,489	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 300,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 200001
(v= <1 [0.0347%])

---

URL Link: EA695480.1

Genome info for EA695480.1:

EA695480 14337 bp DNA linear PAT 10-JUN-2008 Sequence 74359 from patent US 7365185.

Nucleotide count: 14,337

Atom	Atom Count	Percent
Carbon	68,750	32.3906
Hydrogen	75,474	35.5585
Nitrogen	54,448	25.6524
Oxygen	13,581	6.3985
Totals	212,253	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 400,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 300001
(v= <1 [0.0991%])

---

URL Link: MX519141.1

Genome info for MX519141.1:

MX519141 11326 bp DNA linear PAT 28-JUN-2021 Sequence 2781 from patent US 10961585.

Nucleotide count: 11,326

Atom	Atom Count	Percent
Carbon	53,376	32.0309
Hydrogen	59,147	35.4941
Nitrogen	42,571	25.5468
Oxygen	11,545	6.9282
Totals	166,639	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 500,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 400001
(v= <1 [0.0262%])

---

URL Link: MH064508.1

Genome info for MH064508.1:

MH064508 117444 bp DNA circular PLN 08-JUN-2019 Radula japonica voucher 16-8723 chloroplast complete genome.

Nucleotide count: 117,444

Atom	Atom Count	Percent
Carbon	569,471	32.6497
Hydrogen	628,230	36.0185
Nitrogen	428,692	24.5783
Oxygen	117,794	6.7535
Totals	1,744,187	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 600,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 500001
(v= <1 [0.0214%])

---

URL Link: AC133204.3

Genome info for AC133204.3:

AC133204 224181 bp DNA linear ROD 25-NOV-2003 Mus musculus BAC clone RP23-106N3 from chromosome 5 complete

Nucleotide count: 224,181

Atom	Atom Count	Percent
Carbon	1,071,062	32.3550
Hydrogen	1,178,966	35.6146
Nitrogen	847,036	25.5875
Oxygen	213,284	6.4429
Totals	3,310,348	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 700,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 600001
(v= <1 [0.0841%])

---

URL Link: JX684087.1

Genome info for JX684087.1:

JX684087 41468 bp DNA linear ENV 26-APR-2013 Uncultured organism clone FLSS-21 genomic sequence.

Nucleotide count: 41,468

Atom	Atom Count	Percent
Carbon	195,141	32.0406
Hydrogen	215,920	35.4524
Nitrogen	157,202	25.8114
Oxygen	40,779	6.6956
Totals	609,042	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 800,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 700001
(v= <1 [0.0457%])

---

URL Link: CP014211.1

Genome info for CP014211.1:

CP014211 4106512 bp DNA circular BCT 17-DEC-2019 Bordetella pertussis strain J377 chromosome complete genome.

Nucleotide count: 4,106,512

Atom	Atom Count	Percent
Carbon	19,140,791	31.7939
Hydrogen	21,196,927	35.2093
Nitrogen	15,755,921	26.1715
Oxygen	4,109,066	6.8254
Totals	60,202,705	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 900,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 800001
(v= <1 [0.0426%])

---

URL Link: CP057830.1

Genome info for CP057830.1:

CP057830 61278 bp DNA circular BCT 13-MAY-2022 Escherichia coli strain RHB13-C18 plasmid pRHB13-C18 2 complete

Nucleotide count: 61,278

Atom	Atom Count	Percent
Carbon	291,362	32.2487
Hydrogen	322,125	35.6536
Nitrogen	229,129	25.3606
Oxygen	60,869	6.7371
Totals	903,485	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

after processing 1,000,000 genomes:

Sample genome HTML tables
showing LOW variation
summaries for this section:

---

GenBank Genome
Table: 900001
(v= <1 [0.0212%])

---

URL Link: AC016793.3

Genome info for AC016793.3:

AC016793 96138 bp DNA linear HTG 15-DEC-1999 Drosophila melanogaster strain y chromosome 2 clone BACR33K22

Nucleotide count: 91,171
Non-Nucleotide Count: 4,967

Atom	Atom Count	Percent
Carbon	435,426	32.3266
Hydrogen	481,317	35.7336
Nitrogen	338,611	25.1389
Oxygen	91,606	6.8009
Totals	1,346,960	~100.00

Variation Summary for this section:

variation count:
@ <1.0% = 100,000

variation count:
@ <2.0% = 0

variation count:
@ <3.0% = 0

variation count:
@ <4.0% = 0

variation count:
@ >=4.0% = 0

---

Total processed 1,052,789 genomes:


Variation totals for all sections:

variation count:
@ <1.0% = 1,052,789
(100.0000%)

variation count:
@ <2.0% = 0
(0.0000%)

variation count:
@ <3.0% = 0
(0.0000%)

variation count:
@ <4.0% = 0
(0.0000%)

variation count:
@ >=4.0% = 0
(0.0000%)