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Monday, October 16, 2023

GC Apdx 4

This is an appendix to: On The Origin Of A Genetic Constant - 2





GenBank Genome
Table: 101
(Indian Cobra)
URL Link: DQ343648.1

Genome info for DQ343648.1:

DQ343648 17213 bp DNA circular VRT 26-JUL-2016 Naja naja mitochondrion complete genome.

Nucleotide count: 17,213

Atom Atom Count Percent
Carbon 81,178 32.3791
Hydrogen 90,421 36.0658
Nitrogen 63,223 25.2175
Oxygen 15,889 6.3376
Totals 250,711 ~100.00




GenBank Genome
Table: 102
(King cobra)
URL Link: EU921899.1

Genome info for EU921899.1:

EU921899 17267 bp DNA circular VRT 30-JUN-2015 Ophiophagus hannah mitochondrion complete genome.

Nucleotide count: 17,267

Atom Atom Count Percent
Carbon 81,330 32.3820
Hydrogen 90,635 36.0868
Nitrogen 63,425 25.2530
Oxygen 15,768 6.2781
Totals 251,158 ~100.00




GenBank Genome
Table: 103
(Koel)
URL Link: OL639163.1

Genome info for OL639163.1:

OL639163 18170 bp DNA circular VRT 04-NOV-2022 Eudynamys scolopaceus voucher NIBRGR0000637157 mitochondrion

Nucleotide count: 18,170

Atom Atom Count Percent
Carbon 85,471 32.3727
Hydrogen 95,206 36.0599
Nitrogen 67,024 25.3858
Oxygen 16,321 6.1817
Totals 264,022 ~100.00




GenBank Genome
Table: 104
(Koel)
URL Link: OM115963.1

Genome info for OM115963.1:

OM115963 17610 bp DNA circular VRT 13-FEB-2022 Eudynamys scolopaceus mitochondrion complete genome.

Nucleotide count: 17,610

Atom Atom Count Percent
Carbon 82,750 32.3595
Hydrogen 92,194 36.0526
Nitrogen 65,018 25.4254
Oxygen 15,759 6.1626
Totals 255,721 ~100.00




GenBank Genome
Table: 105
(Lion)
URL Link: OP930841.1

Genome info for OP930841.1:

OP930841 16629 bp DNA circular MAM 23-JAN-2023 Panthera leo isolate JCK10711 mitochondrion
complete genome.

Nucleotide count: 16,628
Non-Nucleotide Count: 1

Atom Atom Count Percent
Carbon 78,759 32.4031
Hydrogen 87,674 36.0709
Nitrogen 60,776 25.0045
Oxygen 15,851 6.5214
Totals 243,060 ~100.00




GenBank Genome
Table: 106
(Lion)
URL Link: OP930842.1

Genome info for OP930842.1:

OP930842 16627 bp DNA circular MAM 23-JAN-2023 Panthera leo isolate JCK10712 mitochondrion
complete genome.

Nucleotide count: 16,625
Non-Nucleotide Count: 2

Atom Atom Count Percent
Carbon 78,744 32.4024
Hydrogen 87,656 36.0696
Nitrogen 60,770 25.0063
Oxygen 15,849 6.5217
Totals 243,019 ~100.00




GenBank Genome
Table: 107
(Lion)
URL Link: MW257216.1

Genome info for MW257216.1:

MW257216 16624 bp DNA circular MAM 30-JAN-2021 Panthera leo mitochondrion
complete genome.

Nucleotide count: 16,616
Non-Nucleotide Count: 8

Atom Atom Count Percent
Carbon 78,682 32.4010
Hydrogen 87,597 36.0722
Nitrogen 60,733 25.0097
Oxygen 15,826 6.5171
Totals 242,838 ~100.00




GenBank Genome
Table: 108
(Lion)
URL Link: OK512982.1

Genome info for OK512982.1:

OK512982 16687 bp DNA linear MAM 17-NOV-2021 Panthera spelaea from USA mitochondrion
partial genome.

Nucleotide count: 16,625
Non-Nucleotide Count: 62

Atom Atom Count Percent
Carbon 78,760 32.3974
Hydrogen 87,673 36.0637
Nitrogen 60,751 24.9895
Oxygen 15,922 6.5494
Totals 243,106 ~100.00




GenBank Genome
Table: 109
(Lion)
URL Link: OK512983.1

Genome info for OK512983.1:

OK512983 16690 bp DNA linear MAM 17-NOV-2021 Panthera leo atrox from Canada mitochondrion
partial genome.

Nucleotide count: 16,625
Non-Nucleotide Count: 65

Atom Atom Count Percent
Carbon 78,770 32.3986
Hydrogen 87,681 36.0637
Nitrogen 60,747 24.9856
Oxygen 15,930 6.5521
Totals 243,128 ~100.00




GenBank Genome
Table: 110
(Nilgai)
URL Link: EF536350.1

Genome info for EF536350.1:

EF536350 16322 bp DNA circular MAM 17-APR-2013 Boselaphus tragocamelus mitochondrion
complete genome.

Nucleotide count: 16,322

Atom Atom Count Percent
Carbon 77,357 32.4393
Hydrogen 86,007 36.0666
Nitrogen 59,913 25.1242
Oxygen 15,190 6.3699
Totals 238,467 ~100.00




GenBank Genome
Table: 111
(Peacock)
URL Link: KJ741403.1

Genome info for KJ741403.1:

KJ741403 16760 bp DNA circular VRT 08-JUL-2014 Pavoraja nitida isolate GN2574 mitochondrion complete genome.

Nucleotide count: 16,760

Atom Atom Count Percent
Carbon 79,989 32.5229
Hydrogen 89,080 36.2192
Nitrogen 60,338 24.5329
Oxygen 16,540 6.7250
Totals 245,947 ~100.00




GenBank Genome
Table: 112
(Peacock)
URL Link: OP035102.1

Genome info for OP035102.1:

OP035102 16831 bp DNA linear VRT 07-DEC-2022 UNVERIFIED: Iniistius pavo voucher USNM:408870 mitochondrion

Nucleotide count: 16,831

Atom Atom Count Percent
Carbon 78,929 32.2080
Hydrogen 88,401 36.0732
Nitrogen 60,965 24.8776
Oxygen 16,765 6.8412
Totals 245,060 ~100.00




GenBank Genome
Table: 113
(Peacock)
URL Link: JN184067.1

Genome info for JN184067.1:

JN184067 11427 bp DNA linear VRT 28-FEB-2012 Pavoraja nitida mitochondrion partial genome.

Nucleotide count: 10,218
Non-Nucleotide Count: 1,209

Atom Atom Count Percent
Carbon 48,635 32.5194
Hydrogen 54,478 36.4262
Nitrogen 36,016 24.0818
Oxygen 10,428 6.9726
Totals 149,557 ~100.00




GenBank Genome
Table: 114
(Pig)
URL Link: CU074298.10

Genome info for CU074298.10:

CU074298 193610 bp DNA linear MAM 04-SEP-2007 Pig DNA sequence from clone CH242-141E21 on chromosome 1
complete

Nucleotide count: 193,610

Atom Atom Count Percent
Carbon 931,036 32.4546
Hydrogen 1,028,497 35.8520
Nitrogen 712,681 24.8431
Oxygen 196,518 6.8503
Totals 2,868,732 ~100.00




GenBank Genome
Table: 115
(Pig)
URL Link: CU074335.11

Genome info for CU074335.11:

CU074335 136653 bp DNA linear MAM 24-JUN-2010 Pig DNA sequence from clone CH242-169D21 on chromosome 1
complete

Nucleotide count: 136,653

Atom Atom Count Percent
Carbon 653,041 32.3513
Hydrogen 719,448 35.6410
Nitrogen 514,268 25.4765
Oxygen 131,838 6.5312
Totals 2,018,595 ~100.00




GenBank Genome
Table: 116
(Pig)
URL Link: CU076045.6

Genome info for CU076045.6:

CU076045 185084 bp DNA linear MAM 30-JAN-2010 Pig DNA sequence from clone CH242-172L24 on chromosome 1
complete

Nucleotide count: 185,084

Atom Atom Count Percent
Carbon 879,230 32.2234
Hydrogen 968,209 35.4845
Nitrogen 704,673 25.8260
Oxygen 176,431 6.4661
Totals 2,728,543 ~100.00




GenBank Genome
Table: 117
(Pig)
URL Link: CU076058.21

Genome info for CU076058.21:

CU076058 191712 bp DNA linear MAM 12-AUG-2008 Pig DNA sequence from clone CH242-126J8 on chromosome 4
complete

Nucleotide count: 191,712

Atom Atom Count Percent
Carbon 913,485 32.2930
Hydrogen 1,008,510 35.6522
Nitrogen 718,560 25.4021
Oxygen 188,188 6.6527
Totals 2,828,743 ~100.00




GenBank Genome
Table: 118
(Pig)
URL Link: CU076102.21

Genome info for CU076102.21:

CU076102 219318 bp DNA linear MAM 22-FEB-2008 Pig DNA sequence from clone CH242-68C14 on chromosome 1
complete

Nucleotide count: 219,318

Atom Atom Count Percent
Carbon 1,037,984 32.1108
Hydrogen 1,149,046 35.5465
Nitrogen 822,010 25.4294
Oxygen 223,472 6.9133
Totals 3,232,512 ~100.00




GenBank Genome
Table: 119
(Rabbit)
URL Link: MN296708.1

Genome info for MN296708.1:

MN296708 16740 bp DNA circular MAM 09-SEP-2020 Oryctolagus cuniculus mitochondrion
complete genome.

Nucleotide count: 16,740

Atom Atom Count Percent
Carbon 79,245 32.4138
Hydrogen 88,429 36.1704
Nitrogen 60,603 24.7886
Oxygen 16,202 6.6272
Totals 244,479 ~100.00




GenBank Genome
Table: 120
(Rabbit)
URL Link: MN518689.1

Genome info for MN518689.1:

MN518689 17000 bp DNA circular MAM 13-MAR-2021 Oryctolagus cuniculus mitochondrion
complete genome.

Nucleotide count: 17,000

Atom Atom Count Percent
Carbon 80,465 32.4115
Hydrogen 89,793 36.1688
Nitrogen 61,551 24.7929
Oxygen 16,452 6.6269
Totals 248,261 ~100.00




Interim Totals For Tables 101-120:
(Total atom count: 17,285,659)

Atom Type Atom Type Count Low High Variation Average
Carbon 5,583,840 32.1108 32.5229 0.4121% 32.3033%
Hydrogen 6,176,635 35.4845 36.4262 0.9417% 35.7327%
Nitrogen 4,374,045 24.0818 25.8260 1.7442% 25.3045%
Oxygen 1,151,139 6.1626 6.9726 0.8100% 6.6595%



GenBank Genome
Table: 121
(Rabbit)
URL Link: MN953621.1

Genome info for MN953621.1:

MN953621 17179 bp DNA circular MAM 23-MAY-2020 Oryctolagus cuniculus mitochondrion
complete genome.

Nucleotide count: 17,174
Non-Nucleotide Count: 5

Atom Atom Count Percent
Carbon 81,310 32.4164
Hydrogen 90,741 36.1763
Nitrogen 62,137 24.7726
Oxygen 16,642 6.6348
Totals 250,830 ~100.00




GenBank Genome
Table: 122
(Rabbit)
URL Link: KJ810977.1

Genome info for KJ810977.1:

KJ810977 93574 bp DNA linear MAM 25-MAY-2014 Oryctolagus cuniculus clone BAC LBAB 239A08
complete sequence.

Nucleotide count: 93,574

Atom Atom Count Percent
Carbon 446,057 32.3114
Hydrogen 496,135 35.9389
Nitrogen 339,449 24.5889
Oxygen 98,854 7.1608
Totals 1,380,495 ~100.00




GenBank Genome
Table: 123
(Rabbit)
URL Link: KJ810978.1

Genome info for KJ810978.1:

KJ810978 83793 bp DNA linear MAM 25-MAY-2014 Oryctolagus cuniculus clone BAC LBAB 319H05
complete sequence.

Nucleotide count: 83,793

Atom Atom Count Percent
Carbon 397,335 32.1776
Hydrogen 439,871 35.6224
Nitrogen 312,987 25.3468
Oxygen 84,624 6.8532
Totals 1,234,817 ~100.00




GenBank Genome
Table: 124
(Rhesus monkey)
URL Link: DI209294.1

Genome info for DI209294.1:

DI209294 15001 bp DNA linear PAT 23-OCT-2013 KR 1020100105550-A/162: Modulation of factor 7 expression.

Nucleotide count: 13,947
Non-Nucleotide Count: 1,054

Atom Atom Count Percent
Carbon 65,490 32.0129
Hydrogen 72,599 35.4879
Nitrogen 52,653 25.7379
Oxygen 13,832 6.7614
Totals 204,574 ~100.00




GenBank Genome
Table: 125
(Rhesus monkey)
URL Link: DI350042.1

Genome info for DI350042.1:

DI350042 10001 bp DNA linear PAT 08-JUL-2014 KR 1020130098162-A/4: MODULATION OF TRANSTHYRETIN EXPRESSION.

Nucleotide count: 10,001

Atom Atom Count Percent
Carbon 47,837 32.3612
Hydrogen 52,796 35.7159
Nitrogen 37,296 25.2303
Oxygen 9,893 6.6925
Totals 147,822 ~100.00




GenBank Genome
Table: 126
(Rhesus monkey)
URL Link: HZ494028.1

Genome info for HZ494028.1:

HZ494028 168001 bp DNA linear PAT 25-MAY-2016 JP 2016019538-A/4: MODULATION OF HUNTINGTIN EXPRESSION.

Nucleotide count: 161,268
Non-Nucleotide Count: 6,733

Atom Atom Count Percent
Carbon 770,941 32.2973
Hydrogen 853,918 35.7735
Nitrogen 592,808 24.8347
Oxygen 169,346 7.0945
Totals 2,387,013 ~100.00




GenBank Genome
Table: 127
(Rhesus monkey)
URL Link: HZ530198.1

Genome info for HZ530198.1:

HZ530198 174000 bp DNA linear PAT 25-MAY-2016 JP 2016501513-A/189: MODULATION OF ANDROGEN RECEPTOR EXPRESSION.

Nucleotide count: 173,449
Non-Nucleotide Count: 551

Atom Atom Count Percent
Carbon 833,379 32.4416
Hydrogen 922,496 35.9107
Nitrogen 633,760 24.6708
Oxygen 179,228 6.9769
Totals 2,568,863 ~100.00




GenBank Genome
Table: 128
(Rhesus monkey)
URL Link: HW144537.1

Genome info for HW144537.1:

HW144537 168001 bp DNA linear PAT 25-JUN-2013 JP 2013504329-A/4: MODULATION OF HUNTINGTIN EXPRESSION.

Nucleotide count: 161,268
Non-Nucleotide Count: 6,733

Atom Atom Count Percent
Carbon 770,941 32.2973
Hydrogen 853,918 35.7735
Nitrogen 592,808 24.8347
Oxygen 169,346 7.0945
Totals 2,387,013 ~100.00




GenBank Genome
Table: 129
(Rhinoceros)
URL Link: MZ736693.1

Genome info for MZ736693.1:

MZ736693 16828 bp DNA circular MAM 23-MAR-2022 Rhinoceros unicornis isolate KNP1 mitochondrion
complete genome.

Nucleotide count: 16,828

Atom Atom Count Percent
Carbon 79,511 32.4147
Hydrogen 88,545 36.0976
Nitrogen 61,667 25.1401
Oxygen 15,570 6.3475
Totals 245,293 ~100.00




GenBank Genome
Table: 130
(Rhinoceros)
URL Link: MZ736694.1

Genome info for MZ736694.1:

MZ736694 16828 bp DNA circular MAM 23-MAR-2022 Rhinoceros unicornis isolate KNP2 mitochondrion
complete genome.

Nucleotide count: 16,828

Atom Atom Count Percent
Carbon 79,509 32.4143
Hydrogen 88,544 36.0977
Nitrogen 61,666 25.1400
Oxygen 15,571 6.3480
Totals 245,290 ~100.00




GenBank Genome
Table: 131
(Rhinoceros)
URL Link: MZ736695.1

Genome info for MZ736695.1:

MZ736695 16828 bp DNA circular MAM 23-MAR-2022 Rhinoceros unicornis isolate KNP3 mitochondrion
complete genome.

Nucleotide count: 16,828

Atom Atom Count Percent
Carbon 79,509 32.4143
Hydrogen 88,544 36.0977
Nitrogen 61,666 25.1400
Oxygen 15,571 6.3480
Totals 245,290 ~100.00




GenBank Genome
Table: 132
(Rhinoceros)
URL Link: MZ736696.1

Genome info for MZ736696.1:

MZ736696 16828 bp DNA circular MAM 23-MAR-2022 Rhinoceros unicornis isolate PWLS1 mitochondrion
complete genome.

Nucleotide count: 16,828

Atom Atom Count Percent
Carbon 79,510 32.4146
Hydrogen 88,545 36.0979
Nitrogen 61,665 25.1395
Oxygen 15,571 6.3480
Totals 245,291 ~100.00




GenBank Genome
Table: 133
(Rhinoceros)
URL Link: MZ736697.1

Genome info for MZ736697.1:

MZ736697 16828 bp DNA circular MAM 23-MAR-2022 Rhinoceros unicornis isolate PWLS2 mitochondrion
complete genome.

Nucleotide count: 16,828

Atom Atom Count Percent
Carbon 79,512 32.4148
Hydrogen 88,546 36.0978
Nitrogen 61,666 25.1395
Oxygen 15,571 6.3479
Totals 245,295 ~100.00




GenBank Genome
Table: 134
(Sheep)
URL Link: OM869257.1

Genome info for OM869257.1:

OM869257 16451 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Ovis aries isolate Chokla mitochondrion sequence.

Nucleotide count: 16,451

Atom Atom Count Percent
Carbon 77,986 32.4424
Hydrogen 86,752 36.0891
Nitrogen 60,226 25.0542
Oxygen 15,419 6.4143
Totals 240,383 ~100.00




GenBank Genome
Table: 135
(Sheep)
URL Link: OM869258.1

Genome info for OM869258.1:

OM869258 16451 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Ovis aries isolate Chokla mitochondrion sequence.

Nucleotide count: 16,451

Atom Atom Count Percent
Carbon 77,984 32.4424
Hydrogen 86,750 36.0891
Nitrogen 60,228 25.0556
Oxygen 15,415 6.4128
Totals 240,377 ~100.00




GenBank Genome
Table: 136
(Sheep)
URL Link: OM869259.1

Genome info for OM869259.1:

OM869259 16451 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Ovis aries isolate Chokla mitochondrion sequence.

Nucleotide count: 16,451

Atom Atom Count Percent
Carbon 77,981 32.4413
Hydrogen 86,746 36.0876
Nitrogen 60,234 25.0582
Oxygen 15,415 6.4129
Totals 240,376 ~100.00




GenBank Genome
Table: 137
(Sheep)
URL Link: OM869260.1

Genome info for OM869260.1:

OM869260 16451 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Ovis aries isolate Deccani mitochondrion sequence.

Nucleotide count: 16,451

Atom Atom Count Percent
Carbon 77,985 32.4425
Hydrogen 86,751 36.0893
Nitrogen 60,227 25.0550
Oxygen 15,416 6.4132
Totals 240,379 ~100.00




GenBank Genome
Table: 138
(Sheep)
URL Link: OM869261.1

Genome info for OM869261.1:

OM869261 16451 bp DNA linear MAM 16-OCT-2022 UNVERIFIED: Ovis aries isolate Deccani mitochondrion sequence.

Nucleotide count: 16,451

Atom Atom Count Percent
Carbon 77,987 32.4431
Hydrogen 86,753 36.0898
Nitrogen 60,225 25.0540
Oxygen 15,416 6.4132
Totals 240,381 ~100.00




GenBank Genome
Table: 139
(Siberian crane)
URL Link: FJ769846.1

Genome info for FJ769846.1:

FJ769846 16688 bp DNA circular VRT 08-MAY-2012 Grus leucogeranus mitochondrion complete genome.

Nucleotide count: 16,688

Atom Atom Count Percent
Carbon 78,287 32.3122
Hydrogen 87,452 36.0950
Nitrogen 61,098 25.2176
Oxygen 15,446 6.3752
Totals 242,283 ~100.00




GenBank Genome
Table: 140
(Siberian crane)
URL Link: MH041490.1

Genome info for MH041490.1:

MH041490 16747 bp DNA circular VRT 02-FEB-2019 Grus leucogeranus mitochondrion complete genome.

Nucleotide count: 16,747

Atom Atom Count Percent
Carbon 78,545 32.3113
Hydrogen 87,764 36.1038
Nitrogen 61,268 25.2040
Oxygen 15,511 6.3808
Totals 243,088 ~100.00




Interim Totals For Tables 121-140:
(Total atom count: 13,475,153)

Atom Type Atom Type Count Low High Variation Average
Carbon 4,357,596 32.0129 32.4431 0.4302% 32.3380%
Hydrogen 4,834,166 35.4879 36.1763 0.6884% 35.8747%
Nitrogen 3,355,734 24.5889 25.7379 1.1490% 24.9031%
Oxygen 927,657 6.3475 7.1608 0.8133% 6.8842%


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