Appendix Avian

This is an appendix to: On The Origin of the Genes of Viruses - 15

The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

---

Coronaviridae (Avian) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Han_2018_ERR1398074; 298,235 bases)

Corona Virus Id	Virus Length	Part Type	Part Pos	Part Length	Part Match	Segment Matches
KX258195	27,615	gene	529	19,828	0	536
	27,615	gene	20,308	3,509	0	87
	27,615	gene	23,817	173	0	4
	27,615	gene	23,990	191	0	3
	27,615	gene	24,165	323	0	10
	27,615	gene	24,457	680	0	11
	27,615	gene	25,497	197	0	4
	27,615	gene	25,691	248	0	2
	27,615	gene	25,882	1,229	0	24
KY626044	27,618	gene	529	19,834	0	487
	27,618	gene	20,314	3,509	0	83
	27,618	gene	23,823	364	0	7
	27,618	gene	24,171	323	0	7
	27,618	gene	24,463	680	0	14
	27,618	gene	25,503	442	0	10
	27,618	gene	25,888	1,226	0	30
KY626045	27,652	gene	529	19,834	0	479
	27,652	gene	20,314	3,488	0	79
	27,652	gene	23,802	367	0	8
	27,652	gene	24,150	329	0	8
	27,652	gene	24,451	677	0	16
	27,652	gene	25,488	442	0	12
	27,652	gene	25,873	1,229	0	25
KY933089	27,573	gene	435	19,882	0	522
	27,573	gene	435	11,849	0	314
	27,573	gene	20,268	3,497	0	77
	27,573	gene	23,765	173	0	4
	27,573	gene	23,938	191	0	5
	27,573	gene	24,110	332	0	14
	27,573	gene	24,411	680	0	11
	27,573	gene	25,092	284	0	6
	27,573	gene	25,297	146	0	6
	27,573	gene	25,455	197	0	6
	27,573	gene	25,649	248	0	5
	27,573	gene	25,840	1,229	0	33
	27,573	gene	27,078	221	0	8
KY933090	27,573	gene	435	19,882	0	522
	27,573	gene	435	11,849	0	313
	27,573	gene	20,268	3,497	0	76
	27,573	gene	23,765	173	0	4
	27,573	gene	23,938	191	0	5
	27,573	gene	24,110	332	0	14
	27,573	gene	24,411	680	0	11
	27,573	gene	25,092	284	0	6
	27,573	gene	25,297	146	0	6
	27,573	gene	25,455	197	0	6
	27,573	gene	25,649	248	0	5
	27,573	gene	25,840	1,229	0	33
	27,573	gene	27,078	221	0	8
MK071267	27,632	gene	529	19,834	0	478
	27,632	gene	23,802	173	0	4
	27,632	gene	23,975	194	0	4
	27,632	gene	24,150	329	0	8
	27,632	gene	24,451	677	0	16
	27,632	gene	25,488	197	0	5
	27,632	gene	25,682	248	0	2
	27,632	gene	25,873	1,229	0	25
MN262644	27,523	gene	529	11,807	0	323
	27,523	gene	12,411	7,973	0	211
	27,523	gene	20,320	3,491	0	87
	27,523	gene	23,811	173	0	2
	27,523	gene	23,984	191	0	6
	27,523	gene	24,156	329	0	9
	27,523	gene	24,457	677	0	18
	27,523	gene	25,493	197	0	5
	27,523	gene	25,687	248	0	7
	27,523	gene	25,878	1,229	0	25

The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

---

Coronaviridae (Avian) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Han_2018_ERR1398089; 368,996 bases)

Corona Virus Id	Virus Length	Part Type	Part Pos	Part Length	Part Match	Segment Matches
KX258195	27,615	gene	529	19,828	0	801
	27,615	gene	20,308	3,509	0	148
	27,615	gene	23,817	173	0	3
	27,615	gene	23,990	191	0	12
	27,615	gene	24,165	323	0	13
	27,615	gene	24,457	680	0	20
	27,615	gene	25,497	197	0	7
	27,615	gene	25,691	248	0	9
	27,615	gene	25,882	1,229	0	45
KY626044	27,618	gene	529	19,834	0	763
	27,618	gene	20,314	3,509	0	144
	27,618	gene	23,823	364	0	10
	27,618	gene	24,171	323	0	16
	27,618	gene	24,463	680	0	18
	27,618	gene	25,503	442	0	15
	27,618	gene	25,888	1,226	0	44
KY626045	27,652	gene	529	19,834	0	768
	27,652	gene	20,314	3,488	0	130
	27,652	gene	23,802	367	0	11
	27,652	gene	24,150	329	0	13
	27,652	gene	24,451	677	0	30
	27,652	gene	25,488	442	0	15
	27,652	gene	25,873	1,229	0	39
KY933089	27,573	gene	435	19,882	0	759
	27,573	gene	435	11,849	0	466
	27,573	gene	20,268	3,497	0	139
	27,573	gene	23,765	173	0	4
	27,573	gene	23,938	191	0	12
	27,573	gene	24,110	332	0	15
	27,573	gene	24,411	680	0	20
	27,573	gene	25,092	284	0	13
	27,573	gene	25,297	146	0	5
	27,573	gene	25,455	197	0	6
	27,573	gene	25,649	248	0	9
	27,573	gene	25,840	1,229	0	39
	27,573	gene	27,078	221	0	11
KY933090	27,573	gene	435	19,882	0	759
	27,573	gene	435	11,849	0	466
	27,573	gene	20,268	3,497	0	141
	27,573	gene	23,765	173	0	4
	27,573	gene	23,938	191	0	12
	27,573	gene	24,110	332	0	16
	27,573	gene	24,411	680	0	20
	27,573	gene	25,092	284	0	13
	27,573	gene	25,297	146	0	5
	27,573	gene	25,455	197	0	6
	27,573	gene	25,649	248	0	9
	27,573	gene	25,840	1,229	0	39
	27,573	gene	27,078	221	0	11
MK071267	27,632	gene	529	19,834	0	768
	27,632	gene	23,802	173	0	2
	27,632	gene	23,975	194	0	9
	27,632	gene	24,150	329	0	13
	27,632	gene	24,451	677	0	30
	27,632	gene	25,488	197	0	7
	27,632	gene	25,682	248	0	9
	27,632	gene	25,873	1,229	0	40
MN262644	27,523	gene	529	11,807	0	446
	27,523	gene	12,411	7,973	0	291
	27,523	gene	20,320	3,491	0	139
	27,523	gene	23,811	173	0	9
	27,523	gene	23,984	191	0	8
	27,523	gene	24,156	329	0	15
	27,523	gene	24,457	677	0	26
	27,523	gene	25,493	197	0	6
	27,523	gene	25,687	248	0	9
	27,523	gene	25,878	1,229	0	37

The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

---

Coronaviridae (Avian) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Ma_2019_SRR413588; 279,968 bases)

Corona Virus Id	Virus Length	Part Type	Part Pos	Part Length	Part Match	Segment Matches
KX258195	27,615	gene	529	19,828	0	552
	27,615	gene	20,308	3,509	0	102
	27,615	gene	23,817	173	0	3
	27,615	gene	23,990	191	0	2
	27,615	gene	24,165	323	0	11
	27,615	gene	24,457	680	0	18
	27,615	gene	25,497	197	0	4
	27,615	gene	25,691	248	0	8
	27,615	gene	25,882	1,229	0	37
KY626044	27,618	gene	529	19,834	0	575
	27,618	gene	20,314	3,509	0	95
	27,618	gene	23,823	364	0	4
	27,618	gene	24,171	323	0	11
	27,618	gene	24,463	680	0	15
	27,618	gene	25,503	442	0	12
	27,618	gene	25,888	1,226	0	40
KY626045	27,652	gene	529	19,834	0	539
	27,652	gene	20,314	3,488	0	88
	27,652	gene	23,802	367	0	6
	27,652	gene	24,150	329	0	8
	27,652	gene	24,451	677	0	22
	27,652	gene	25,488	442	0	11
	27,652	gene	25,873	1,229	0	36
KY933089	27,573	gene	435	19,882	0	584
	27,573	gene	435	11,849	0	363
	27,573	gene	20,268	3,497	0	90
	27,573	gene	23,765	173	0	5
	27,573	gene	23,938	191	0	4
	27,573	gene	24,110	332	0	9
	27,573	gene	24,411	680	0	21
	27,573	gene	25,092	284	0	5
	27,573	gene	25,297	146	0	4
	27,573	gene	25,455	197	0	1
	27,573	gene	25,649	248	0	7
	27,573	gene	25,840	1,229	0	38
	27,573	gene	27,078	221	0	2
KY933090	27,573	gene	435	19,882	0	583
	27,573	gene	435	11,849	0	363
	27,573	gene	20,268	3,497	0	91
	27,573	gene	23,765	173	0	5
	27,573	gene	23,938	191	0	4
	27,573	gene	24,110	332	0	10
	27,573	gene	24,411	680	0	21
	27,573	gene	25,092	284	0	5
	27,573	gene	25,297	146	0	4
	27,573	gene	25,455	197	0	1
	27,573	gene	25,649	248	0	8
	27,573	gene	25,840	1,229	0	38
	27,573	gene	27,078	221	0	2
MK071267	27,632	gene	529	19,834	0	542
	27,632	gene	23,802	173	0	1
	27,632	gene	23,975	194	0	5
	27,632	gene	24,150	329	0	8
	27,632	gene	24,451	677	0	23
	27,632	gene	25,488	197	0	4
	27,632	gene	25,682	248	0	6
	27,632	gene	25,873	1,229	0	37
MN262644	27,523	gene	529	11,807	0	330
	27,523	gene	12,411	7,973	0	237
	27,523	gene	20,320	3,491	0	101
	27,523	gene	23,811	173	0	4
	27,523	gene	23,984	191	0	4
	27,523	gene	24,156	329	0	14
	27,523	gene	24,457	677	0	18
	27,523	gene	25,493	197	0	2
	27,523	gene	25,687	248	0	4
	27,523	gene	25,878	1,229	0	45

The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

---

Coronaviridae (Avian) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Ma_2019_SRR413675; 392,017 bases)

Corona Virus Id	Virus Length	Part Type	Part Pos	Part Length	Part Match	Segment Matches
KX258195	27,615	gene	529	19,828	0	784
	27,615	gene	20,308	3,509	0	168
	27,615	gene	23,817	173	0	8
	27,615	gene	23,990	191	0	10
	27,615	gene	24,165	323	0	13
	27,615	gene	24,457	680	0	26
	27,615	gene	25,497	197	0	7
	27,615	gene	25,691	248	0	6
	27,615	gene	25,882	1,229	0	29
KY626044	27,618	gene	529	19,834	0	810
	27,618	gene	20,314	3,509	0	163
	27,618	gene	23,823	364	0	17
	27,618	gene	24,171	323	0	14
	27,618	gene	24,463	680	0	28
	27,618	gene	25,503	442	0	17
	27,618	gene	25,888	1,226	0	34
KY626045	27,652	gene	529	19,834	0	783
	27,652	gene	20,314	3,488	0	156
	27,652	gene	23,802	367	0	16
	27,652	gene	24,150	329	0	18
	27,652	gene	24,451	677	0	25
	27,652	gene	25,488	442	0	14
	27,652	gene	25,873	1,229	0	30
KY933089	27,573	gene	435	19,882	0	799
	27,573	gene	435	11,849	0	476
	27,573	gene	20,268	3,497	0	163
	27,573	gene	23,765	173	0	8
	27,573	gene	23,938	191	0	11
	27,573	gene	24,110	332	0	17
	27,573	gene	24,411	680	0	29
	27,573	gene	25,092	284	0	12
	27,573	gene	25,297	146	0	6
	27,573	gene	25,455	197	0	7
	27,573	gene	25,649	248	0	7
	27,573	gene	25,840	1,229	0	36
	27,573	gene	27,078	221	0	9
KY933090	27,573	gene	435	19,882	0	803
	27,573	gene	435	11,849	0	479
	27,573	gene	20,268	3,497	0	162
	27,573	gene	23,765	173	0	8
	27,573	gene	23,938	191	0	11
	27,573	gene	24,110	332	0	16
	27,573	gene	24,411	680	0	29
	27,573	gene	25,092	284	0	12
	27,573	gene	25,297	146	0	6
	27,573	gene	25,455	197	0	7
	27,573	gene	25,649	248	0	8
	27,573	gene	25,840	1,229	0	36
	27,573	gene	27,078	221	0	9
MK071267	27,632	gene	529	19,834	0	779
	27,632	gene	23,802	173	0	7
	27,632	gene	23,975	194	0	15
	27,632	gene	24,150	329	0	18
	27,632	gene	24,451	677	0	25
	27,632	gene	25,488	197	0	6
	27,632	gene	25,682	248	0	5
	27,632	gene	25,873	1,229	0	28
MN262644	27,523	gene	529	11,807	0	473
	27,523	gene	12,411	7,973	0	310
	27,523	gene	20,320	3,491	0	150
	27,523	gene	23,811	173	0	7
	27,523	gene	23,984	191	0	13
	27,523	gene	24,156	329	0	14
	27,523	gene	24,457	677	0	22
	27,523	gene	25,493	197	0	8
	27,523	gene	25,687	248	0	7
	27,523	gene	25,878	1,229	0	28

The following HTML table columns are as follows:

Genbank Virus Id: the Gen Bank database id of the Coronaviridae virus found in various animal types.

Virus Length: the number of bases in the Coronaviridae virus.

Part Type: the type of the Coronaviridae genome part (gene, misc_feature, mat_peptide, stem_loop, or UTR).

Part Pos: first position of the Coronaviridae part in its bases.

Part Length: the number of bases comprising the Coronaviridae part.

Part Match: how many times that complete Coronaviridae part was found in the Human Gut Database (GVD) virus (rare).

Segment Matches: number of 10-base long segments of the Coronaviridae part found in the GVD virus bases.

---

Coronaviridae (Avian) viruses found in
the Human Gut Virus Database (GVD)
GVD virus: (Shkoporov_2019_SRR9161502; 293,130 bases)

Corona Virus Id	Virus Length	Part Type	Part Pos	Part Length	Part Match	Segment Matches
KX258195	27,615	gene	529	19,828	0	753
	27,615	gene	20,308	3,509	0	134
	27,615	gene	23,817	173	0	5
	27,615	gene	23,990	191	0	9
	27,615	gene	24,165	323	0	9
	27,615	gene	24,457	680	0	22
	27,615	gene	25,497	197	0	6
	27,615	gene	25,691	248	0	8
	27,615	gene	25,882	1,229	0	31
KY626044	27,618	gene	529	19,834	0	755
	27,618	gene	20,314	3,509	0	137
	27,618	gene	23,823	364	0	11
	27,618	gene	24,171	323	0	11
	27,618	gene	24,463	680	0	26
	27,618	gene	25,503	442	0	17
	27,618	gene	25,888	1,226	0	33
KY626045	27,652	gene	529	19,834	0	753
	27,652	gene	20,314	3,488	0	127
	27,652	gene	23,802	367	0	12
	27,652	gene	24,150	329	0	17
	27,652	gene	24,451	677	0	27
	27,652	gene	25,488	442	0	14
	27,652	gene	25,873	1,229	0	36
KY933089	27,573	gene	435	19,882	0	728
	27,573	gene	435	11,849	0	437
	27,573	gene	20,268	3,497	0	141
	27,573	gene	23,765	173	0	3
	27,573	gene	23,938	191	0	11
	27,573	gene	24,110	332	0	11
	27,573	gene	24,411	680	0	20
	27,573	gene	25,092	284	0	11
	27,573	gene	25,297	146	0	7
	27,573	gene	25,455	197	0	8
	27,573	gene	25,649	248	0	7
	27,573	gene	25,840	1,229	0	31
	27,573	gene	27,078	221	0	10
KY933090	27,573	gene	435	19,882	0	729
	27,573	gene	435	11,849	0	438
	27,573	gene	20,268	3,497	0	145
	27,573	gene	23,765	173	0	3
	27,573	gene	23,938	191	0	11
	27,573	gene	24,110	332	0	11
	27,573	gene	24,411	680	0	20
	27,573	gene	25,092	284	0	11
	27,573	gene	25,297	146	0	7
	27,573	gene	25,455	197	0	8
	27,573	gene	25,649	248	0	6
	27,573	gene	25,840	1,229	0	31
	27,573	gene	27,078	221	0	10
MK071267	27,632	gene	529	19,834	0	749
	27,632	gene	23,802	173	0	6
	27,632	gene	23,975	194	0	10
	27,632	gene	24,150	329	0	17
	27,632	gene	24,451	677	0	27
	27,632	gene	25,488	197	0	5
	27,632	gene	25,682	248	0	4
	27,632	gene	25,873	1,229	0	35
MN262644	27,523	gene	529	11,807	0	441
	27,523	gene	12,411	7,973	0	290
	27,523	gene	20,320	3,491	0	123
	27,523	gene	23,811	173	0	6
	27,523	gene	23,984	191	0	11
	27,523	gene	24,156	329	0	10
	27,523	gene	24,457	677	0	25
	27,523	gene	25,493	197	0	5
	27,523	gene	25,687	248	0	5
	27,523	gene	25,878	1,229	0	40